| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_0908 |
|---|
| Symbol | |
|---|
| ID | 8596387 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 959551 |
|---|
| End bp | 961074 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1538 |
|---|
| Protein accession | YP_003307707 |
|---|
| Protein GI | 269119530 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAACCAGA AACTCAAGGA AAAGATTCAA GAAGCGTTTG CATCAGTATT GCCGATTACT
GCAATTGTAC TGATTCTGAG TACGCTGATG GTGCCGATAT CCATAGGTAC CATTGTTATG
TTTATAGCAG GAGCTTCCCT GCTTATCATC GGTATGGGAT TTTTCTCATT GGGAGCCGAT
ATGGCTATGA TTCCTATAGG TGAAGCAACA GGAATCCAGC TTACTAAAAC AAAAAAATTA
TTGTTATCTG TGATACTCTG TTTTACAATG GGGTTCATTA TCACTATTGC CGAGCCGGAT
TTACAGGTAC TGGCAAGACA GGTACCGGCT ATTCCGAATA ATGTATTAAT TCTTACAATA
GCAGCAGGTG TAGGGGTATT TCTTGTTATT GCCCTTCTTC GTGTATTATT CAGGGTGAAT
TTGTCTTTGC TGCTGATAAT TTTTTATCTG ATAATGTTTG TATTATCAAT ATTTGTTCCT
AATAATTTTA TAGCAGTGGC ATTCGATTCG GGCGGAGTAA CGACAGGCCC TATAACTGTT
CCTTTTATTC TTGCTATGGG AACCGGTCTT GCATCGATTC GTAGTGATAA GGACTCGCAG
GATGACAGTT TCGGTTTTGT GGCATTATGT AGTATAGGGC CTATTCTCGC AGTTATGCTG
CTGGGAATAA GCTATAATCC AAGTGATGCC GAATACGGGC AGGTAGTGAT ACCTGCAGTA
GAAACAATGC AGGATGTAGT AAAGCAGTTT ACGGTAGAAT TACCGGTATA TACAAAAGAA
GTATCACTGG CAATGCTTCC TATATGTGCT TTTTTTGCAA TATTTCAGCT TGTGTCAAGA
AAATTCAATA AACATCAGCT TGGAAGAATT GGAATAGGTG TTGTTTATAC ACTTATTGGT
CTTGTGTTAT TTCTTACCGG CGTAAATGTA GGGTTTATTC CTGTGGGAAG TCTGCTCGGA
GGACAGCTTG CCGATTCAGC CTTTAAATGG TTCTTGATTC CGATAGGAAT GCTTATAGGA
TATTTTATAG TTGCTGCCGA GCCGGCTATT CACGTACTTA ATAAACAGGT AGAGGAAGTT
TCCGGCGGTG CTATCCCGTC AAAGGCAATG AATCTCTGTC TTTCATTGGG AGTGGCAACA
TCAGTGGGAA TAGCTATGAT AAGAGTATTA ACAAGCATAT CGATTTACTG GTTTCTTATA
CCGGGCTATG TAATAGCCAT AGCACTGACA TTTTATGTTC CCAAAATTTT TACAGGAATA
GCATTTGACA GTGGAGGCGT AGCAAGCGGA CCTATGACAA CAACATTTCT GCTTCCATTT
GCAATGGGTG CCTGTGAAAC ACTGAATGGA AATGTACTTA CAGATGCGTT CGGAATTGTA
GCCATGGTTG CTATGACTCC GCTTATAGCC ATTCAGGTAA TGGGACTTAT TTATAAAAAG
AAAATGGCTG AAATGGCAAC AGAAAGTTCA TCTGATGATA ATTTTACGGA ATTTATTAAT
TATGACGGGG AGGAGGATCA GTAA
|
|---|
| Protein sequence | MNQKLKEKIQ EAFASVLPIT AIVLILSTLM VPISIGTIVM FIAGASLLII GMGFFSLGAD
MAMIPIGEAT GIQLTKTKKL LLSVILCFTM GFIITIAEPD LQVLARQVPA IPNNVLILTI
AAGVGVFLVI ALLRVLFRVN LSLLLIIFYL IMFVLSIFVP NNFIAVAFDS GGVTTGPITV
PFILAMGTGL ASIRSDKDSQ DDSFGFVALC SIGPILAVML LGISYNPSDA EYGQVVIPAV
ETMQDVVKQF TVELPVYTKE VSLAMLPICA FFAIFQLVSR KFNKHQLGRI GIGVVYTLIG
LVLFLTGVNV GFIPVGSLLG GQLADSAFKW FLIPIGMLIG YFIVAAEPAI HVLNKQVEEV
SGGAIPSKAM NLCLSLGVAT SVGIAMIRVL TSISIYWFLI PGYVIAIALT FYVPKIFTGI
AFDSGGVASG PMTTTFLLPF AMGACETLNG NVLTDAFGIV AMVAMTPLIA IQVMGLIYKK
KMAEMATESS SDDNFTEFIN YDGEEDQ
|
|---|
| |