Gene Sterm_0902 details

Gene Information

• Locus tag: Sterm_0902
• ID: 8596381
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 945345
• End bp: 952421
• Gene Length: 7077 bp
• Protein Length: 2358 aa
• Translation table: 11
• GC content: 39%
• Product: outer membrane autotransporter barrel domain protein
• Protein accession: YP_003307701
• Protein GI: 269119524

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA ATAAAAAATT ATTAATGTCA TTTCTAGCAC TAAATGCATT AATACCGACA 
TATTTGAAGG GAGCCGAAAC CCCGCTCTCG CTAAAATATG ATAAGCTCTA TAATAAAATA 
ACTAAAAACA TAGAACTCGG GAAATCTAAT GATGACTCTT ACCGTTTATT GGAGAAAGTA 
TTAAATCAAA GAAACAGAGA ATTAAAAGAT CTGTATTTAC AGAGTGATTA TATAGTGAAA 
CCTGAATATC TGGAATGGCA GGTGTTTTTG AATACTTATT ATACCGAGAG AAGGAAGGGA 
GACAATACAC TGGAAAATGC AAAATATTAT TCAGTGTCAA CTACTTACAG CGGGAAGAAG 
AAGTTTAATC AGAATGCCTA TAATGAAATG GCAGATGCAC TCCGGGCTTC GGGTCTGCTT 
ACTGAAAGCC AGCTGGCTTC TATTATGGCC GGTCATTATA ATGTGATAAA TTCTTTAAAT 
GTAAATGATC AAAAAATAAT TAGAAATATT CTTGACGAAA GGCTTTCATC TATTACACAG 
ACAGACGGAT TCAGAATTTA TAAGGCACCC CAGAAACCAA AAGAGATAGA CCTTGGAATA 
AATATAATAC CAAAAGTGAT TAACAGACAG CCGTTAAATC CGAATCCGAC ACTGCCGCAG 
GAACCCAGTA TGAATGTGCC TGTATTCACG CCTTCGACAC CGGCAGCTCC GGCAGTACCG 
TCACTGACAA TAAAGACTTT TAATCCTGTC AGTCCTAATG TGGATCAGCC GACTCTTGGA 
GAGGCTCCTG ATTTTAATAT AAAACTGGGA TCGTTTTGTA ACTATATGAA TCCAAACTGT 
GAAACGCGGG GAACAGACGG AGGTCCCTAT GCAGGTATGG TAAGTAATGC AGTATCATAT 
GAAAGCGTGG GGATTTATGA TATAACTGCA GGTACGCAAA GTAATTTCGG GGCAACTACG 
GTTCTTACTC CGGGAAATCC GGCTATAAGA CATGCCTGGC TTACATCAGG ACCTTTTAAT 
GCTGCACTGT TAAAAGTTTA TTTTGATTAT GGAAGTTCAC TTACCCATAA TTCAATAGCA 
ACGTTAAAAG AAAATCTGAC AATAGATTCT ATTTCCAATT CTGTCATACA GGGTGATGCT 
TCTTTGGCAG CCTTTAACCG TCAGCAGTTT CTGGTGGGCG GTTCAAGAAT TGCCACAGTT 
GATAACGTAA TGAACGGAGC ATTAGTAAAT CAGGCTGTTG TAAATCTTGT GGGTCCTTTA 
GTTGTTGGCT TTGAAGTGCA GACTGATACG AACTGGTCAA GTCAGGGTTA TGGAAATCAG 
GGGACAAGAA GGCTTTCTAA TGAAGGGACT ATAACTGACG AGGCAGAAAC TACAAGCGTT 
GACTTAAATG GTGTGTTAGC TCTGAACAGC AGTACAACAA TAAATTTAGC TCCTTTTGCA 
GGCGGAACAC CTATTACAGT AAGAAGAGAC GGAAGCGGTT ATACAGGATA CAAGGTAGGA 
ATAATACTTA CTTATGAAAA TGATGATAGT GTTACAGGGC ATAATTATAT TTTACGGAAT 
GAAGCAGCAG GGAAAATAAA ATTTAACAGT GAAAAATCAG TAGGAATACA GGTTTATGCT 
CCTCAGTCTT TGAATACCAA TGTAAATGTA GACAATGTAA GCGGCGGGGA AATTTCTATG 
GGCGGAATAG AAAGCTACGG CTTGAAATTA TCTTCTAGAA TAAGTTCGAC ATCTACATTC 
GCAAATAACG GAACAATAAA TATAAGCGGT TCTACAAGTG ACTTGAGCGG ATCACGGTCT 
TCGGGAATAG GGGTAATAGA AGATCCTACA TTGACCGGGG GAAGTTCTGT AAGAGGATAT 
ACCGGAGTAG CGAGAAATTC AACAACAGGA ATAATAAATG TTTCGGGCGG GAAGGGAAAT 
ACAGGAGTCT TCCTGAAAGT AGCAGCTGCA GATAATATTA CAAATGACGG TATAATAAAT 
GTAATCGGAG AGAAAAACTC GGCAATGAGA GTAGATAACG GAGTAGTTGC TACTGATGCT 
GCCGGAAATC CTCGAATAAT CAATTCAGGT TCCGGGATAA TAAACATAAA TTCCGGAGAG 
AACTTCGGAG CTATAGCTGC TGACGGAAAT GCGTCAAACA GGGCGGAAGC AGTGAATAAC 
GGAACTATAA CTATAGAAAA TAAAGGGCTG CCGGGAACAT TTATAGAAAA TATAGTGGGA 
ATGGTTTCTA TAAAAGCAGC AGTTTCAGCC ACAAGCGGTG GTTACATAGA AAATAACGGA 
ACTATCCAGA TGCTGAATGA TATAAAAACT TCTCAGGGAA TGGCAATTCT TGCAAGTTCA 
GAAGGATTAA ACACAGGAAA TATTATAATA AATTCCGGGA CTTTAGGTGA AAGTTCAGTT 
GGTGTTTATA ATGAAGGAAC ATTCAGTATG ACAGGCGGTC TTGTAGATGT AGCCTCGCCA 
AAGGGAATCG GAATATATGC CAAAAATAAT TCGGCAGTTA CTGCTGTAAC TGGAGGAATA 
ATCAGGGTTT CAAACGGAGC TATAGGACTA TATGCCGATG ATAAAGGAAA TCTTGGAAAC 
GGGGCAACAA TAAATCTCAC AGGCGGTGCT AAGCTGGAAG TAAATAGCGG CGGACTTATG 
CTTTATAACT ATTCGGGAAC AAGCGGAAAT CCTGTAGGAA AATTTAATGT GACAGGAACA 
GTAAATACAG ATATTAATGC CGGAGGAACA GCATTTTATT TTAAAGGTGT TCCGTCAGGA 
ATTAATACAT TTTTGACAAA TATGGTAACA GGAAGCGGAA ACCTGAATGT AAAACTGACA 
AGTTCTGATT CTAGTCTTTT TGTACTTGAT AATCCGGGAA GTACTATAAA TCTCAGTGAT 
ACTACATCTA TCGGAATTAT AGGAAGTCTG CCGCTGACAG TAACAATCGA TCCTTCGAGT 
GTTTCTAATT ATAAACCGTA CTCGGTATTT AAGGGCGGTC TGAATGTAGA TCTGGATGTA 
AATGTGGATG ACCCGAATGA TGCTTATAAC AGATCGGAAT TTTTGTCATC TAAGGTTACA 
GTGCTTTCAG GTAAAACTAT ATCCGGTGTG GGAGCAGGAA AATACGGTAT CGGGCAGGAA 
AGCTTCCTCG GAAGTGTAAA TAGAAATGAT ATACTAATAA CTGTAAATAA CGGTGCTGCT 
ATAAATATGA CCGGAGCAGG TTCGGCAGGT ATTATAGCAA ATTTCGGGAC AGTTATTAAT 
AACGGACAGA TATCGGCAAC CGGGGCAAAC TCAATAGGAG TGGTATCATA CAACGGAACA 
CTTACACAAA ACAATAATAT AATAAAAGTT GGTGAAAGCG GAGCAGGTAT ATATGGAGAA 
AATAAAGTAA ACAGCTCATA CGGCAACGGC TTTATAGAGA TTGAAAATAA CGGACTGATA 
ACAACAGCAG CATCAGCAGG AGGAACAAGC TACGGTATTT ATGCCAATAA TACAGAAGCT 
TTTCTGACTA GAGCTGACTC ATTAATAAGA CTTAATTCAG GGTCGGAGAT AAATATGTCA 
CCGCAGGACG GCGGTGTTGG TGTAAGTGCT GTAAAATCAA CATTAACAAG TAACGGTAAA 
ATAACCGTGG GTAAAAATGG TATAGCAGTA TATGCAGATA ATTCCGAAAT AAATATAAAC 
AGCGGAGATA TAAATCTAAA CGGAGATAAT GCAATAGGAT TTTACCTGAT TAACGGCAGT 
GCATTTAACG GTAATTCAGG GACAATAAAT ATAAACGGAC AGAATGTGGT ACTTTTTAAT 
ATAATAAATT CAACATTTAA TAATAATCTG TCAATAAACG CAGCACCGGG ATCTACATAT 
GTAGTGGGAA ATCTTTCAAA TGCCGCATAT ACCCACTTAG GAACTAATAC TCTTTTTTCC 
GACAGTGTAC TTCTAAATGG GACTAATTCT GCAATACTTG TAGGCAGCAG TTCAAATATA 
AGTTCATCTG GAACAGGAGT AGTGGGAGTA TCAGTAGACG GTCAGTATTT ATCACCATTT 
GCTCCTCCTT ATACAGTAGA AGGAGAAAAT GCAGGAACCA TAGTCCTTGG AGATAATTCA 
GCAGCTGTAT ATGGTAAAAA TAGTGCGAGA CTGAAAAACA GCGGAATAAT CGGACTGGGA 
GCTAATTCTG TGGGACTCTA TTCCTTAGGT GCAGGTGCAG AGACTGAAAA TACAGGGCTT 
ATAACTTTGG GAAATAGTTC TGTGGGTCTT TATCAAAAAG GCGGAATAAA TATAGTCAAT 
AATAATACAA TAAATGGAGC CGGAATCGGT GCTATAGGAA TGTATATGGA CAGCAATACA 
GGACTTACAG CTAATAACGG ACTGATAGAG CTTTCGGGAG ACAGGGCAAT AGGAATTTAT 
GCCGCAGGAA GTCCGCAGAA TATAATTAAT AACGGAACTA TAAAAGTATA TGACTCCGCT 
TCAATGGATG ATCCCAGCAT AGGAATTTAT ACTAAGGGTA TCTCAGATAC AATAGTAAAC 
AGTACTTCCG GAATGATAGA AGCAGGAAAA AGATCACTGG GAGTTTACAG TCTGGGGCCA 
CAGGTAGATC ATATGGGAAC TTTGAAGGTA GGAGACGAAG GAACAGGAAT ATATAAGGAT 
ACAGGTATAT TAAACATTCA CACCGGTTCT GCTGTACAAA TAGGAAATAA TGAAGCAGTG 
GGATTATATG GTATAAACGG TTCCAGCATA AATATAGCTC CGGGAGTAAA TTTTCAGCTG 
GGATCGGGCA GCTACGGCGT AATAGCTGAG TCAGGTTCCA GTTTAAACAA CCAATCGGCA 
ATAACACTCA GTGACAGTAA TATTTTTGTG TATGGTAACG GAGCCTCTGC TATTACAAAC 
AGCGGACAGA TTAATATGAC CGGCTCTGAC AATACGGCAT TTTATACAAT TAAGGCCGGA 
AATATTTTTA ATACTGGAAA TATAACAGGG ACAGCAGGTA CAGGGAATAT AGCTTTGTAT 
AACAGAGGAC ATTATGTAAC TGAAGTGCAG CAGCCTGACG GGACAATGAA ACTGGAAGGA 
CTTATTACAG CGGGTTATAT AGAAAATGAC GCAGATATAA CATTGGGAGA TTCATTTTTA 
GTAACAAATG CCCACGGTGT AAAGACCGGA TATTCAGTAG GGATTTATGC CGAAGGGTCA 
AGTGCGGTTA ATAAAGCTAC AAGAACAATA ACCGTGGGAA AAGACGGTGT AGGAATGTAT 
GCAAGAGATG CTGCAGCACC TTCGTATAAT TACGGAACGA TAACCGGAAC CGGCGATAAA 
ATCATCGGAA TGTTTGCAGA TAATACAAGG GCAGAAAATC ATGGACTGAT TAAGCTTACA 
GGCGATGAAG TAGTGGGAAT GGCAGGAAGA AACGGAGCAT ATATCTATAA TGCACCTTCT 
GGGGTAATAG AAGTTACCGG GAAAAATGTA ACAGGTATAT ATCTCGCAGG AGCTGATACC 
AAGGTAGAGA ACAAAGGACA GATTATAATA AAGAATACCG GAGATCCTCT GGAGGATCAG 
GGAGTCGGAC TGAAATATGC AGCAAGCTTT GATGAGGATA ATATAATAGG CGGAGTAGGA 
AGTATAACAG GAACTGGTTA TATAGACCAA GGCTATACGA CGACAGTATA TAAGCTTCCT 
GAAATGCCGT CACTGATAAA TTCCGGAGAG ATAACTATAG ATCTGGGAAG TAAGTTCTCA 
TATGAAAATA TGAAGGTAAT AGTGAAGCTG GATCCGACAA CAAATGAAGC AACAACAAGT 
TTTTCCGATA CGATAGGATT CGGAGGGACA ACAATTCCTG AAAAGCTGGA AATATCACCG 
GACTTTTCAC AGGGAACATC AGCAGACAGA TATACATTTA AGAATATATT CCGGGGAATG 
GACGGAACTG GGGAGTACAT AAGCCAGTCA TTAACTTGGG ATGCCACAGG TCAGGGTACA 
GATATAGTAA TGACAAGAAT ACCTTATATG GATTTTACAA GCGGTTTTTG GTATGAGGAA 
TTCGGTCAGA CATTGAATGA CAGATATGCC AATCAGACAG GAAATGCGTT GAAAATCTAT 
GATAAAATAG ATATGATACA GACAGAACCG CATTTCAGAC ATGCTGTAGC CAGTCTTGCA 
GGAAATGTAT ATGCCAATAT AAATCAGCGT GAAGAAGACA TGGCAGGAAT GCTTGAAGAA 
TCATTACATA CATTGCAAAA TTCAGATAAT AATACAAAAG AAAATGTGAA AATCAGCATA 
ATCGGCGTGA AAGGTAAGAC AGAAGAGGAT ACTGACGGCG TAGTACCGTA TAAATACAGT 
GCAACAGGAA TTCTTGCATT GAGAGAAGTA GAAAGAACAT ATAAACATAC CTTTGGTTAT 
TCACTTGGAT ACCTTCATAC AGGCTTTGAG TTTGAAGACC ATAATAAAAG TGAGGAATGG 
GTAGATACAA TTCAGCTTGG ACTGCATAAT AAATACAGTG TTCAGGGATG GAGTCTGCGT 
AATGATCTTA CGGGAAGGGT AAGCTTCCAT AATATAGACA GAAATATTGA CTGGCCTGAT 
CAGTCAAAAG GTGTGGAAAG ATCAGAAATG AATGGTACAT ATGAAACTTA TTCCATTACT 
TCTGACAATA TTCTGGGAAA AGAATTTAGT ATAGGCAAAA AATTTAGTGT TACACCATAT 
GGAGCATTTA AAGCGATGTA TGTGACAAGA CCCACATTCA GCGAAAGCGG TCTTGAAGCA 
CTTCAGATAG AAGGAAATGA TGCATGGAGT GCTAAGCCCA GAGCAGGTCT GGAACTAAAA 
ACTACATTGC CGCTGGGTGC TAAGACAGCA TGGCAGCTGA AAGGCTCGCT TGATTTTGCA 
TATGAATACG AGCTGGCTGA CTTGAATGAA AGGGAAAAAG CAAGATTGAT AGCAGTAGAA 
GACGGTTATC ACAAGCTGTC AAAGCCGGAA GATGAAAAAG GAACATTCAG AACAAGAGCA 
GTACTCGGAG TGGAAGTGGC AGACAGATAT GGAATATTCC TAACCGGGGA ATATAATCTG 
GGTAATGATG AACAGGACGG CTACAGAGCA GGGATAACTT TAAAAGCTGT GTTTTAA 

 

Protein sequence

MKKNKKLLMS FLALNALIPT YLKGAETPLS LKYDKLYNKI TKNIELGKSN DDSYRLLEKV 
LNQRNRELKD LYLQSDYIVK PEYLEWQVFL NTYYTERRKG DNTLENAKYY SVSTTYSGKK 
KFNQNAYNEM ADALRASGLL TESQLASIMA GHYNVINSLN VNDQKIIRNI LDERLSSITQ 
TDGFRIYKAP QKPKEIDLGI NIIPKVINRQ PLNPNPTLPQ EPSMNVPVFT PSTPAAPAVP 
SLTIKTFNPV SPNVDQPTLG EAPDFNIKLG SFCNYMNPNC ETRGTDGGPY AGMVSNAVSY 
ESVGIYDITA GTQSNFGATT VLTPGNPAIR HAWLTSGPFN AALLKVYFDY GSSLTHNSIA 
TLKENLTIDS ISNSVIQGDA SLAAFNRQQF LVGGSRIATV DNVMNGALVN QAVVNLVGPL 
VVGFEVQTDT NWSSQGYGNQ GTRRLSNEGT ITDEAETTSV DLNGVLALNS STTINLAPFA 
GGTPITVRRD GSGYTGYKVG IILTYENDDS VTGHNYILRN EAAGKIKFNS EKSVGIQVYA 
PQSLNTNVNV DNVSGGEISM GGIESYGLKL SSRISSTSTF ANNGTINISG STSDLSGSRS 
SGIGVIEDPT LTGGSSVRGY TGVARNSTTG IINVSGGKGN TGVFLKVAAA DNITNDGIIN 
VIGEKNSAMR VDNGVVATDA AGNPRIINSG SGIININSGE NFGAIAADGN ASNRAEAVNN 
GTITIENKGL PGTFIENIVG MVSIKAAVSA TSGGYIENNG TIQMLNDIKT SQGMAILASS 
EGLNTGNIII NSGTLGESSV GVYNEGTFSM TGGLVDVASP KGIGIYAKNN SAVTAVTGGI 
IRVSNGAIGL YADDKGNLGN GATINLTGGA KLEVNSGGLM LYNYSGTSGN PVGKFNVTGT 
VNTDINAGGT AFYFKGVPSG INTFLTNMVT GSGNLNVKLT SSDSSLFVLD NPGSTINLSD 
TTSIGIIGSL PLTVTIDPSS VSNYKPYSVF KGGLNVDLDV NVDDPNDAYN RSEFLSSKVT 
VLSGKTISGV GAGKYGIGQE SFLGSVNRND ILITVNNGAA INMTGAGSAG IIANFGTVIN 
NGQISATGAN SIGVVSYNGT LTQNNNIIKV GESGAGIYGE NKVNSSYGNG FIEIENNGLI 
TTAASAGGTS YGIYANNTEA FLTRADSLIR LNSGSEINMS PQDGGVGVSA VKSTLTSNGK 
ITVGKNGIAV YADNSEININ SGDINLNGDN AIGFYLINGS AFNGNSGTIN INGQNVVLFN 
IINSTFNNNL SINAAPGSTY VVGNLSNAAY THLGTNTLFS DSVLLNGTNS AILVGSSSNI 
SSSGTGVVGV SVDGQYLSPF APPYTVEGEN AGTIVLGDNS AAVYGKNSAR LKNSGIIGLG 
ANSVGLYSLG AGAETENTGL ITLGNSSVGL YQKGGINIVN NNTINGAGIG AIGMYMDSNT 
GLTANNGLIE LSGDRAIGIY AAGSPQNIIN NGTIKVYDSA SMDDPSIGIY TKGISDTIVN 
STSGMIEAGK RSLGVYSLGP QVDHMGTLKV GDEGTGIYKD TGILNIHTGS AVQIGNNEAV 
GLYGINGSSI NIAPGVNFQL GSGSYGVIAE SGSSLNNQSA ITLSDSNIFV YGNGASAITN 
SGQINMTGSD NTAFYTIKAG NIFNTGNITG TAGTGNIALY NRGHYVTEVQ QPDGTMKLEG 
LITAGYIEND ADITLGDSFL VTNAHGVKTG YSVGIYAEGS SAVNKATRTI TVGKDGVGMY 
ARDAAAPSYN YGTITGTGDK IIGMFADNTR AENHGLIKLT GDEVVGMAGR NGAYIYNAPS 
GVIEVTGKNV TGIYLAGADT KVENKGQIII KNTGDPLEDQ GVGLKYAASF DEDNIIGGVG 
SITGTGYIDQ GYTTTVYKLP EMPSLINSGE ITIDLGSKFS YENMKVIVKL DPTTNEATTS 
FSDTIGFGGT TIPEKLEISP DFSQGTSADR YTFKNIFRGM DGTGEYISQS LTWDATGQGT 
DIVMTRIPYM DFTSGFWYEE FGQTLNDRYA NQTGNALKIY DKIDMIQTEP HFRHAVASLA 
GNVYANINQR EEDMAGMLEE SLHTLQNSDN NTKENVKISI IGVKGKTEED TDGVVPYKYS 
ATGILALREV ERTYKHTFGY SLGYLHTGFE FEDHNKSEEW VDTIQLGLHN KYSVQGWSLR 
NDLTGRVSFH NIDRNIDWPD QSKGVERSEM NGTYETYSIT SDNILGKEFS IGKKFSVTPY 
GAFKAMYVTR PTFSESGLEA LQIEGNDAWS AKPRAGLELK TTLPLGAKTA WQLKGSLDFA 
YEYELADLNE REKARLIAVE DGYHKLSKPE DEKGTFRTRA VLGVEVADRY GIFLTGEYNL 
GNDEQDGYRA GITLKAVF