Gene Sterm_0878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_0878 
Symbol 
ID8596361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand+ 
Start bp927783 
End bp928442 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content33% 
IMG OID 
Productcell wall hydrolase/autolysin 
Protein accessionYP_003307681 
Protein GI269119504 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TATGTTTGAT AATAGGGCAC GGACAATATA AAAAAGATAA AAATGGACAA 
ACATACAGAG AACCGGGAGC GACTAATCCA CACAACAAAT ATACTGAGTT TCAATATAAC 
AGCGAATTAG TGCCTAAAAT ATCTGAAAAA CTTAAAGGAC AATATGAAGT CTTGATTGAA 
AATAGAGGTA ATAACAGCAT TGAAGATACA AGTAAAATAA ATGCTTTTAA TCCAGAGCTT 
ATAATTTCAT TTCATTGTAA TGACTCGGAA AATGATACGG CAACAGGAAC TGAGGCTATC 
TATTATCCCG GAAGTGTAAA GGGAAAAGGA TTGGCAACAA TAGTTTCTAA AAATGTTTCA 
GCAGCTTTAG GACTTAAAAA TAGAGGGGCA AAGGAGCCGT GGCAAGGAAG GGGGAATGGA 
TTATTATCGA GAACGAAAGC ACCTTGCATT ATCAGTGAAG GCTTTTTCAT TGATAATGAT 
AATGATTTAA GTGCCGGATT AAATAAAATG AACGATTATG CAGATGCAAT TGTTAAAAGC 
ATACATGAAT TTTTAGGAGA TGAAACAGTG CAGCCAAATC CTGATCCGGT TCCAGATCTG 
GATGAAACTA TTTATATAGT AAAAAATGGA CAAAAAATAG GAGAAATAAA ATATTATTAG
 
Protein sequence
MKKICLIIGH GQYKKDKNGQ TYREPGATNP HNKYTEFQYN SELVPKISEK LKGQYEVLIE 
NRGNNSIEDT SKINAFNPEL IISFHCNDSE NDTATGTEAI YYPGSVKGKG LATIVSKNVS 
AALGLKNRGA KEPWQGRGNG LLSRTKAPCI ISEGFFIDND NDLSAGLNKM NDYADAIVKS 
IHEFLGDETV QPNPDPVPDL DETIYIVKNG QKIGEIKYY