Gene Sterm_0218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_0218 
Symbol 
ID8595714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp229401 
End bp230546 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content38% 
IMG OID 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_003307034 
Protein GI269118857 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0106637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAT CATCATTTAA GATATATGAA GTGAAGCCCA GATGGATTTT TATAAAAATA 
ATAACTGATG AAGGAATAGA AGGCTGGGGT GAAATGATTT CGGGAACTAA AACCGAAACT
GTTACAGCAT GTGCCAATGA GATGTGTAAA AAATTATTAG GACGTGATCC TTTTGATATA
GAAGCATTAT GGCAGGAATT ATACAGATCG TTTTTCAGAG GCGGGCCTGT GAATATGACC
GTAATTTCAG GAATAGAAAC AGCATTATGG GATATAAAAG GAAAGTATTA TAATATGCCT
GTTTATGAGT TTTTGGGCGG AAAAGTCAGG GATAAACTGA AAGTATACTC ATGGATCGGA
GGGGACAGAC CAAATAATGT AGCCGAGGAG GCGAAGCAGC GTTTTGATCA GGGATTTACA
GCAGTGAAAA TGAATGCTAC AGAGGAGCTT CACTATATAG ATTCATATGA AAAAGTAGAT
CAGGTACTGG AAAGAATGAA TTCAATAAAG GAACTGCTTG GTAATAAAAT ACAGGTAGGT
ATTGATTTTC ACGGAAGAGT TCATAAACCT ATGGCAAAAA TACTTATCAA GGAGCTGGAG
CCTTTCAGAC CGATGTTTAT AGAAGAGCCG GTGCTTCCCG AGAACTGGGA TGCAATAATT
GATACAGCTA AAAATTCTCC CATACCAATA GCTACAGGAG AAAGATTAAG TACAAGATGG
GAATTCAAAA GATTGTTTAA CAACAATTCC GTGGATATAA TCCAGCCGGA TGTAGCTCTT
GCCGGAGGAA TACTGGAAAC AAGAAAAATA GCTGCAGCAG CGGAAATGTA TGATATAGCA
GTAGCACCTC ATGCACCTTA CGGTCCTGTA GCTCTTGCAG CTACATTACA GCTTGATATG
TGTACGCCTA ACGTTTTTAT ACAGGAGCAG AGTCTTGGGA TTCACTATAA TAAAGGGTTT
GATCTGATAG ATTTTGTAAA GAACAAAGAG ATATTCATGT TTAAGGATGG TTATCTGGAT
GTACCCGAAA AACCGGGGCT GGGAATAGAA ATTGATGAAG AGCTTGTAAA GAAAGTGTCA
GCAGAAGGAC TCGTCTGGAC TAATCCAAAA TGGAAAAACT ATGACGGAAC TATAGCTGAA
TGGTAG
 
Protein sequence
MKISSFKIYE VKPRWIFIKI ITDEGIEGWG EMISGTKTET VTACANEMCK KLLGRDPFDI 
EALWQELYRS FFRGGPVNMT VISGIETALW DIKGKYYNMP VYEFLGGKVR DKLKVYSWIG
GDRPNNVAEE AKQRFDQGFT AVKMNATEEL HYIDSYEKVD QVLERMNSIK ELLGNKIQVG
IDFHGRVHKP MAKILIKELE PFRPMFIEEP VLPENWDAII DTAKNSPIPI ATGERLSTRW
EFKRLFNNNS VDIIQPDVAL AGGILETRKI AAAAEMYDIA VAPHAPYGPV ALAATLQLDM
CTPNVFIQEQ SLGIHYNKGF DLIDFVKNKE IFMFKDGYLD VPEKPGLGIE IDEELVKKVS
AEGLVWTNPK WKNYDGTIAE W