Gene Ssol_2780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_2780 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp2541690 
End bp2542805 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content38% 
IMG OID 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionACX92863 
Protein GI261603260 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0227253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAA AAGAGCTCTT TATACAATCA TTAAGGGAGT TTCTAAACAG AGATGTTGAG 
AAGATAGTGA ATAAAATAGA CAAAGAAGAT TACTACCCCA GAGATTTAGT TAGAAAGCTT
GGAGAGTTAG GCTTTCTAAT CCCTTTAACT AGTGGTCTAT CAAACTACGA CATGATGATT
ATTTTAGAAG AGATTGCAAA GGTTAGCGGG TCTTTAGCAT TAATTGCTGA TGCTCAAGGA
GAGTTAGCCG GTGAGATGAT TAGATTGTAT GCAAATGAAA GGCAAAAGAA GGAGTTTATG
GAACCATTGA GTAAGGGAGA AATTATAGGT AGTTTTGCCT TAACTGAACC TTCAGGTGGA
AGCGATATAG GTTCCATGAA GACTCTCGCT GAGAAAAGAA ATGGATCGTG GATAATAAAG
GGACATAAGA TGTGGATAAC TCAAGGGCTT TACGCTGACG TTTTCATCAC AGTAGCGAAA
ACGGGTTCAT CTAGACGTGA TTTATCAGTT TTTATAGTGC CCAGAAGTAA TTGCGTTGAG
ACTAGAAAAA TAGAAGTCAT GGGTAATAGG GGAACTGGGA CCGCTGAGGT AATCTTTCAT
AATTGCGAAG TGTCAAACGA TTACGTTGTT GGGGAGGTGA ATAATGGGTG GAACATGGTC
AACTCAGTAT TAGAAATAGG TAGGCTTGCT ATCTCAGGTA TTGCAATAGG TTTGGCTGAG
GCGGCTTTGG AAGAAGCTTT TAAGTGGGCT AAATCAAGAT TTGCATTTGG GAATTCGATT
TATGATTTTC AAGGGATAAG ATGGTATTTC GCAGATGCCA TAGCTAAACT TAACGCAGTT
AAGTCAATGG CTAAGGATGT CAGTAGTAAG TTCGATGAGA ATTCAAAGGA TAAGGGAGTT
TACGTCTCAA TGTTAAAGTT ATTATCTGCA AATATTGCTA ACGAAGTAAT AGACATCTCC
TTACAAGTAT TCGGTGGTAT GGGTTACGCT AAGGGAACTA ACATAGAACG AATATATCGT
GATGCTAGAC TACTTAGGAT AGGTGAGGGA ACTGATGAAG TACAGAGGCA CATTATAGCT
AAATATATTG AACAGTATGG AATACCGTAT ATCTAG
 
Protein sequence
MSEKELFIQS LREFLNRDVE KIVNKIDKED YYPRDLVRKL GELGFLIPLT SGLSNYDMMI 
ILEEIAKVSG SLALIADAQG ELAGEMIRLY ANERQKKEFM EPLSKGEIIG SFALTEPSGG
SDIGSMKTLA EKRNGSWIIK GHKMWITQGL YADVFITVAK TGSSRRDLSV FIVPRSNCVE
TRKIEVMGNR GTGTAEVIFH NCEVSNDYVV GEVNNGWNMV NSVLEIGRLA ISGIAIGLAE
AALEEAFKWA KSRFAFGNSI YDFQGIRWYF ADAIAKLNAV KSMAKDVSSK FDENSKDKGV
YVSMLKLLSA NIANEVIDIS LQVFGGMGYA KGTNIERIYR DARLLRIGEG TDEVQRHIIA
KYIEQYGIPY I