Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_2780 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | + |
Start bp | 2541690 |
End bp | 2542805 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | ACX92863 |
Protein GI | 261603260 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0227253 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGAAA AAGAGCTCTT TATACAATCA TTAAGGGAGT TTCTAAACAG AGATGTTGAG AAGATAGTGA ATAAAATAGA CAAAGAAGAT TACTACCCCA GAGATTTAGT TAGAAAGCTT GGAGAGTTAG GCTTTCTAAT CCCTTTAACT AGTGGTCTAT CAAACTACGA CATGATGATT ATTTTAGAAG AGATTGCAAA GGTTAGCGGG TCTTTAGCAT TAATTGCTGA TGCTCAAGGA GAGTTAGCCG GTGAGATGAT TAGATTGTAT GCAAATGAAA GGCAAAAGAA GGAGTTTATG GAACCATTGA GTAAGGGAGA AATTATAGGT AGTTTTGCCT TAACTGAACC TTCAGGTGGA AGCGATATAG GTTCCATGAA GACTCTCGCT GAGAAAAGAA ATGGATCGTG GATAATAAAG GGACATAAGA TGTGGATAAC TCAAGGGCTT TACGCTGACG TTTTCATCAC AGTAGCGAAA ACGGGTTCAT CTAGACGTGA TTTATCAGTT TTTATAGTGC CCAGAAGTAA TTGCGTTGAG ACTAGAAAAA TAGAAGTCAT GGGTAATAGG GGAACTGGGA CCGCTGAGGT AATCTTTCAT AATTGCGAAG TGTCAAACGA TTACGTTGTT GGGGAGGTGA ATAATGGGTG GAACATGGTC AACTCAGTAT TAGAAATAGG TAGGCTTGCT ATCTCAGGTA TTGCAATAGG TTTGGCTGAG GCGGCTTTGG AAGAAGCTTT TAAGTGGGCT AAATCAAGAT TTGCATTTGG GAATTCGATT TATGATTTTC AAGGGATAAG ATGGTATTTC GCAGATGCCA TAGCTAAACT TAACGCAGTT AAGTCAATGG CTAAGGATGT CAGTAGTAAG TTCGATGAGA ATTCAAAGGA TAAGGGAGTT TACGTCTCAA TGTTAAAGTT ATTATCTGCA AATATTGCTA ACGAAGTAAT AGACATCTCC TTACAAGTAT TCGGTGGTAT GGGTTACGCT AAGGGAACTA ACATAGAACG AATATATCGT GATGCTAGAC TACTTAGGAT AGGTGAGGGA ACTGATGAAG TACAGAGGCA CATTATAGCT AAATATATTG AACAGTATGG AATACCGTAT ATCTAG
|
Protein sequence | MSEKELFIQS LREFLNRDVE KIVNKIDKED YYPRDLVRKL GELGFLIPLT SGLSNYDMMI ILEEIAKVSG SLALIADAQG ELAGEMIRLY ANERQKKEFM EPLSKGEIIG SFALTEPSGG SDIGSMKTLA EKRNGSWIIK GHKMWITQGL YADVFITVAK TGSSRRDLSV FIVPRSNCVE TRKIEVMGNR GTGTAEVIFH NCEVSNDYVV GEVNNGWNMV NSVLEIGRLA ISGIAIGLAE AALEEAFKWA KSRFAFGNSI YDFQGIRWYF ADAIAKLNAV KSMAKDVSSK FDENSKDKGV YVSMLKLLSA NIANEVIDIS LQVFGGMGYA KGTNIERIYR DARLLRIGEG TDEVQRHIIA KYIEQYGIPY I
|
| |