Gene Ssol_2730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_2730 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp2500514 
End bp2501044 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content37% 
IMG OID 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionACX92819 
Protein GI261603216 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.305906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTTTG AATTTGAAAA CTTAGGAATG GGTATTGTCC TCATAAAGCC GAAAGTCTTC 
CCAGATAAAA GAGGCTTCTT TCTTGAAGTA TTTAAATCTG AAGACTTCAC TAAAGCAGAA
ATTCCTAATA TCGTACAAAC TAATATGTCA TTCTCTTTTA AAGGAGTAGT TAGAGGTCTA
CACTATCAGA TAACTCCCAA GGAACAAGGT AAGTTAGTAT TTGTTCCTAA AGGTAAAATA
TTGGATGTTG CTTTAGACCT AAGAAAATCA TCCCCTACTT TCGGGAAATA CGTTAAAGTT
GAGCTTAACG ATGAGAACCA CTACATACTA TGGATACCTC CGGGTTTTGC CCATGGATTT
CAAGCATTAG AAGATTCAAT AGTAGTCTAC TTCCTAACCC ATAACGAATA CTCTAAATCT
GACGAGAGAT GCGTAAATTA CTCTTATGTA GACTGGCCAA TAAAGGAATT TATTATAAGC
GATAAGGACT CACAGTGCCC GCCCTTAGAA AAGGCAGACG TCTTTAATTA A
 
Protein sequence
MPFEFENLGM GIVLIKPKVF PDKRGFFLEV FKSEDFTKAE IPNIVQTNMS FSFKGVVRGL 
HYQITPKEQG KLVFVPKGKI LDVALDLRKS SPTFGKYVKV ELNDENHYIL WIPPGFAHGF
QALEDSIVVY FLTHNEYSKS DERCVNYSYV DWPIKEFIIS DKDSQCPPLE KADVFN