Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_2730 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | - |
Start bp | 2500514 |
End bp | 2501044 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
Protein accession | ACX92819 |
Protein GI | 261603216 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.305906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGTTTG AATTTGAAAA CTTAGGAATG GGTATTGTCC TCATAAAGCC GAAAGTCTTC CCAGATAAAA GAGGCTTCTT TCTTGAAGTA TTTAAATCTG AAGACTTCAC TAAAGCAGAA ATTCCTAATA TCGTACAAAC TAATATGTCA TTCTCTTTTA AAGGAGTAGT TAGAGGTCTA CACTATCAGA TAACTCCCAA GGAACAAGGT AAGTTAGTAT TTGTTCCTAA AGGTAAAATA TTGGATGTTG CTTTAGACCT AAGAAAATCA TCCCCTACTT TCGGGAAATA CGTTAAAGTT GAGCTTAACG ATGAGAACCA CTACATACTA TGGATACCTC CGGGTTTTGC CCATGGATTT CAAGCATTAG AAGATTCAAT AGTAGTCTAC TTCCTAACCC ATAACGAATA CTCTAAATCT GACGAGAGAT GCGTAAATTA CTCTTATGTA GACTGGCCAA TAAAGGAATT TATTATAAGC GATAAGGACT CACAGTGCCC GCCCTTAGAA AAGGCAGACG TCTTTAATTA A
|
Protein sequence | MPFEFENLGM GIVLIKPKVF PDKRGFFLEV FKSEDFTKAE IPNIVQTNMS FSFKGVVRGL HYQITPKEQG KLVFVPKGKI LDVALDLRKS SPTFGKYVKV ELNDENHYIL WIPPGFAHGF QALEDSIVVY FLTHNEYSKS DERCVNYSYV DWPIKEFIIS DKDSQCPPLE KADVFN
|
| |