Gene Ssol_2506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_2506 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp2304140 
End bp2304673 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content34% 
IMG OID 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionACX92638 
Protein GI261603035 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTTTG AATTTAAGGA ACTTGGAATG GGAATAGTTC TCATAAAACC TACTGTCTTC 
CCTGATAAAA GGGGGTTCTT TCTTGAACTA TATAAGTCTA CGGATTTTGT TAATATTCCT
ATTCCGATAC AAACGAATAT GTCTTTCTCT ATTAAGGGCG TAATTAGAGG GTTGCATTAT
CAAATATCCC CTAAGGAACA AGGGAAGATA GTTTTTGTTC CTAAAGGCAG AATTCTTGAT
GTAGCTGTTG ATATTAGGAA ATCCTCTAAA ACTTTCGGAA AATATGTCAG CGTAGAATTA
AACGAGGAGA ACCATTATTT ATTATGGATT CCTCCTGGTT TTGCTCACGG TTTTCAAGCT
TTAGAAGATT CTATAGTAAT TTACTTCATT ACCCATAATC AATATTCACC TAAACACGAA
AGATGTATAA ATTATAGTTA CATAAAAGAT TGGCCCATTA AAGAGGCAAT ACTAAGTGAT
AAAGACCTCC AATGTCCTCC AATAGAAAAG GCTGAAGTAT TCAATAATAT TTAG
 
Protein sequence
MPFEFKELGM GIVLIKPTVF PDKRGFFLEL YKSTDFVNIP IPIQTNMSFS IKGVIRGLHY 
QISPKEQGKI VFVPKGRILD VAVDIRKSSK TFGKYVSVEL NEENHYLLWI PPGFAHGFQA
LEDSIVIYFI THNQYSPKHE RCINYSYIKD WPIKEAILSD KDLQCPPIEK AEVFNNI