Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_2486 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | + |
Start bp | 2287593 |
End bp | 2288660 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | |
Product | transposase IS116/IS110/IS902 family protein |
Protein accession | ACX92622 |
Protein GI | 261603019 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0095339 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCGAAT GGGAAATTGA AGCAAAGTCT TCGGGCACAG GCGTGACGAG CCCCTACCGT CGGACTGAAC ATTGTGAAAA TACTCACGAA TATAGGTGTG ACACAAGCGT AGGGGTAATT GGAATAGACG TATCAAAAGA ACACTTGGTA ACAAGTAAGG GGAGGGTGAG AAAATTCACA AACAACGAGA AGGGCTACGA AGAAATACTA ACCATGAAGC CAAACATCAT CGTAATAGAA CCCACAGGAG TATACTCAAC AAGACCTTGC CAATACTTCA AAGAAAGAGG AGTGAAAGTC CTACTAGTCA GCCTTGCTAT GGAAAGAAAA GGACGTAAGG GGAAGAAAAC AGATTTTTAC GACGCAGAAA AACTTGAAAA CATGGTAAAT AAGTCTAGAG AATACGTTAA CAACCCCTTG AAAGAGTTAG TATCACTCTA CCTCTTCATG AAGGATGTGC AAACGAAACA AGAGAACAGG TTAAGGAGAG CTCTCTTCCT CGTGAGCGAC GAGGAGAAGT TGAGCGAGGA GAGATTGGAG AAGTTCTCTA AGGGAGACTT CTCTGACGTA AAACTGTATC AACTGGAATA CACTGGTACA GTACTACGTG AGATTCAAGT CCTAGCGAGG ACACTAATTC AAACACGAGA AGAGTTGAAG GAGGTGAGGA AAATGATAGA GGGTAATGTG CCTCAAGACC ACGTGTTACT CACGATTTCC GGAATAGGGA AACTGGCAGC TGGGATTATA ATTGGGATTG TGGGTGATAT TAGGCGCTTC CCAAGACCTG AATCCTTCGT TGCTTATTGC GGTTTAGACC CGGTAGTTGA GAGGAGTGGT AGGATTGAGG TTAGAAAGGG TATCTCCAAG AGGGGTAACA AGTATTTGCG TAGCTTGTTT TATTTCCTTG CCGAGACTCA ATATTCGCGT AACCCTACTC TCCTTAAGCT CCACGAAGCT CACAAGGACA AACTGAAGGG TAGGAAACTG TACACTGCCT TAGCTAGGAA GTTGGCTAGG ATAGTGTGGA GTGTTTGGTA TAATAATAAG CCTTATGAGG TGAAGTGA
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Protein sequence | MVEWEIEAKS SGTGVTSPYR RTEHCENTHE YRCDTSVGVI GIDVSKEHLV TSKGRVRKFT NNEKGYEEIL TMKPNIIVIE PTGVYSTRPC QYFKERGVKV LLVSLAMERK GRKGKKTDFY DAEKLENMVN KSREYVNNPL KELVSLYLFM KDVQTKQENR LRRALFLVSD EEKLSEERLE KFSKGDFSDV KLYQLEYTGT VLREIQVLAR TLIQTREELK EVRKMIEGNV PQDHVLLTIS GIGKLAAGII IGIVGDIRRF PRPESFVAYC GLDPVVERSG RIEVRKGISK RGNKYLRSLF YFLAETQYSR NPTLLKLHEA HKDKLKGRKL YTALARKLAR IVWSVWYNNK PYEVK
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