Gene Ssol_2486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_2486 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp2287593 
End bp2288660 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content44% 
IMG OID 
Producttransposase IS116/IS110/IS902 family protein 
Protein accessionACX92622 
Protein GI261603019 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0095339 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGAAT GGGAAATTGA AGCAAAGTCT TCGGGCACAG GCGTGACGAG CCCCTACCGT 
CGGACTGAAC ATTGTGAAAA TACTCACGAA TATAGGTGTG ACACAAGCGT AGGGGTAATT
GGAATAGACG TATCAAAAGA ACACTTGGTA ACAAGTAAGG GGAGGGTGAG AAAATTCACA
AACAACGAGA AGGGCTACGA AGAAATACTA ACCATGAAGC CAAACATCAT CGTAATAGAA
CCCACAGGAG TATACTCAAC AAGACCTTGC CAATACTTCA AAGAAAGAGG AGTGAAAGTC
CTACTAGTCA GCCTTGCTAT GGAAAGAAAA GGACGTAAGG GGAAGAAAAC AGATTTTTAC
GACGCAGAAA AACTTGAAAA CATGGTAAAT AAGTCTAGAG AATACGTTAA CAACCCCTTG
AAAGAGTTAG TATCACTCTA CCTCTTCATG AAGGATGTGC AAACGAAACA AGAGAACAGG
TTAAGGAGAG CTCTCTTCCT CGTGAGCGAC GAGGAGAAGT TGAGCGAGGA GAGATTGGAG
AAGTTCTCTA AGGGAGACTT CTCTGACGTA AAACTGTATC AACTGGAATA CACTGGTACA
GTACTACGTG AGATTCAAGT CCTAGCGAGG ACACTAATTC AAACACGAGA AGAGTTGAAG
GAGGTGAGGA AAATGATAGA GGGTAATGTG CCTCAAGACC ACGTGTTACT CACGATTTCC
GGAATAGGGA AACTGGCAGC TGGGATTATA ATTGGGATTG TGGGTGATAT TAGGCGCTTC
CCAAGACCTG AATCCTTCGT TGCTTATTGC GGTTTAGACC CGGTAGTTGA GAGGAGTGGT
AGGATTGAGG TTAGAAAGGG TATCTCCAAG AGGGGTAACA AGTATTTGCG TAGCTTGTTT
TATTTCCTTG CCGAGACTCA ATATTCGCGT AACCCTACTC TCCTTAAGCT CCACGAAGCT
CACAAGGACA AACTGAAGGG TAGGAAACTG TACACTGCCT TAGCTAGGAA GTTGGCTAGG
ATAGTGTGGA GTGTTTGGTA TAATAATAAG CCTTATGAGG TGAAGTGA
 
Protein sequence
MVEWEIEAKS SGTGVTSPYR RTEHCENTHE YRCDTSVGVI GIDVSKEHLV TSKGRVRKFT 
NNEKGYEEIL TMKPNIIVIE PTGVYSTRPC QYFKERGVKV LLVSLAMERK GRKGKKTDFY
DAEKLENMVN KSREYVNNPL KELVSLYLFM KDVQTKQENR LRRALFLVSD EEKLSEERLE
KFSKGDFSDV KLYQLEYTGT VLREIQVLAR TLIQTREELK EVRKMIEGNV PQDHVLLTIS
GIGKLAAGII IGIVGDIRRF PRPESFVAYC GLDPVVERSG RIEVRKGISK RGNKYLRSLF
YFLAETQYSR NPTLLKLHEA HKDKLKGRKL YTALARKLAR IVWSVWYNNK PYEVK