Gene Ssol_2380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_2380 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp2182428 
End bp2183297 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content49% 
IMG OID 
Producttransposase IS4 family protein 
Protein accessionACX92543 
Protein GI261602940 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGTTT ATGAAACGGG ATTCAAAACG GAGTTGAAGT CCCTCGCTAG TTATTTCATC 
GTCAATAATC TTAACGTTAT CTCCCAAGAG TTGGACACGA GGATCGCGGA CGCAGCTCCG
TTCCTGTTGA CAGGGAACAG GGAAAAGGAG TACTTGAAGG TTGTTAGGGA AGGAGAGAAG
GTGATGAGTC AAGGGGAGAG GAGCTTCAAG TTCTACCCTC ACGTGAAAGT TGAGGGAAAG
ACTACAATCG TTGCAGTGGA CGAGACCGCG ATAACCGTGG GAGAGAAGGA GTCGAGGAAG
GTGGAAGGAT TTCAACTCTA CAACGGGAAG AGGAAGGGAG TTAAGTTGAG GTCCGTGGAC
TTGGTGTTCC CCTTGAGGTT GTCCCTCCTC GAGGAGATAG CTGACTTGAG AAGCGATACT
CCCTCCCAGT TCCTGATGAG GGCCGTGAGC GAAGTTGCTC AGCACCTCAA GATAGACTAC
GTTGTTGCTG ACGCGGGTTT CCTGAACTTG AAGGTAATCA AGGAGATGCC CGTGAAGACC
GTGGTAGGAG GTAAGACCAA CCTGAAGGGC TTCAAGGAAC TCTCCAACGT CCCTCTAACC
GAGAAGAAAT GCGAGGTAAA TGACAGGGTT TACGTTGCGT ATAGGGTCCT GAAGTACAAT
GACCTTTACT ACTATGAAGT GATATACGTC AAGGAGAAAC CCAGGCACTT CATCTTCGTT
ACCAACTTCA ATGGAGATCC CTACAAGCTA GCTGAGCTCT ACAGGTTGAG ATGGCAGAGC
GAAGAGGGCT TCAAGGTCAG GAAGGCCAGG ATAAGATACG TTAGTGCTTT CAGAAAGTTT
ATGGCTTATA GGCAAAGGAT ATACCACTAG
 
Protein sequence
MQVYETGFKT ELKSLASYFI VNNLNVISQE LDTRIADAAP FLLTGNREKE YLKVVREGEK 
VMSQGERSFK FYPHVKVEGK TTIVAVDETA ITVGEKESRK VEGFQLYNGK RKGVKLRSVD
LVFPLRLSLL EEIADLRSDT PSQFLMRAVS EVAQHLKIDY VVADAGFLNL KVIKEMPVKT
VVGGKTNLKG FKELSNVPLT EKKCEVNDRV YVAYRVLKYN DLYYYEVIYV KEKPRHFIFV
TNFNGDPYKL AELYRLRWQS EEGFKVRKAR IRYVSAFRKF MAYRQRIYH