Gene Ssol_2348 details

Gene Information

• Locus tag: Ssol_2348
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfolobus solfataricus 98/2
• Kingdom: Archaea
• Replicon accession: CP001800
• Strand: -
• Start bp: 2147846
• End bp: 2148574
• Gene Length: 729 bp
• Protein Length: 242 aa
• Translation table: 11
• GC content: 33%
• Product: CRISPR-associated RAMP protein, Cmr6 family
• Protein accession: ACX92517
• Protein GI: 261602914

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.111592
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAGAC AAAGAGGTAA TCAGTTACTT AGAATAATAT CTGAATATAT GACTAATCTT 
AAAGAAAAAG GACAGAAGTT AGCGAAAGAC AATACAATGG AGAATTTAGT AAATTTCACA 
CCACGATACA ATCTTATAAA ATCTTACCTC GATGATGTGG AAAGAGCTTT AGATAGATCG 
GGATTGTGTT ATGTGAAAAT TACCTTTATA ACTCTAAGTA AATTGCTAAC GGGTTGGAGT 
CCAATATATT TCATAACAGA AGTTCCACTA GCATGGGATA TGATACTAGA TACTCCTTAT 
ATTGCCGGAT CCGAAATAAA GGGGATTGTG AAGAATTATT TTAAAGAAGT AACCAGTAAC 
GATAAAGTAG AATCTTGTTT ATACGGTGAT GAAGGAAAGA TGGGAAAGGT GATTTTCTTC 
AACGCATACC CCATAGATGG TAAGAACGTC TTAACGTATG ATATAATAAC TCCGCATTAT 
AATGGAGCTA AAGACGAATA CAATGTTAAA CCAATTCCTA TAAAGTTCTT AGCTATAAAT 
AAGGGTATTA CGTTCAAGAC GTATTTAGCT TTCGATAATA AAGAGTTGAA TGAGTGTGGA 
AAGGATTCCT TATATTTATT ACTTAAGACT ATGATTTTTT CAATGAGAAT AGGCTGGGGG 
AGAAAAGTAA CTAGAGGATA TGGAAGTTTA GATATAAAGG AGATGGACGT GAAGTGTCAT 
GGTGAGTGA 

 

Protein sequence

MERQRGNQLL RIISEYMTNL KEKGQKLAKD NTMENLVNFT PRYNLIKSYL DDVERALDRS 
GLCYVKITFI TLSKLLTGWS PIYFITEVPL AWDMILDTPY IAGSEIKGIV KNYFKEVTSN 
DKVESCLYGD EGKMGKVIFF NAYPIDGKNV LTYDIITPHY NGAKDEYNVK PIPIKFLAIN 
KGITFKTYLA FDNKELNECG KDSLYLLLKT MIFSMRIGWG RKVTRGYGSL DIKEMDVKCH 
GE