Gene Ssol_2166 details

Gene Information

• Locus tag: Ssol_2166
• ID: 0
• Is gene spliced: No
• Is pseudo gene: Yes
• Organism name: Sulfolobus solfataricus 98/2
• Kingdom: Archaea
• Replicon accession: CP001800
• Strand: +
• Start bp: 1950655
• End bp: 1955170
• Gene Length: 4516 bp
• GC content: 43%

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACGAGGG AGGAGTACTA TAAGGCATTG GAAAAGGCAG TTAACGAGGT CATACTATCC 
ATGACTGGAA CGAGGAAGGA CGTTGCCAAG AGGCTCGTCC TGGGGGCGGT TGTGGGAAGA 
AATGCTACCG AGATAGCTCA GGAGGCCGAG ATGGACTACG AGACCGTGCT GAATAACTTG 
GACAAGGCAG CTCAAGCCAA ACTAATCGAG GTCGTGAAGA AGTTAGTCGG GGATCATCCT 
GTCCTTCTCA TAGTGGACGA CACCCACGAC CACAAGCTCT ACGCTAGGGC CATGCCGGTC 
TCCAGAAACG GGGCGCAGAT CTTCTACTGT AGGGCGCACA AGAGGTTCGA ACCCGCGATC 
CAACTCCTTG TGATTGGCGT CAAGGATCTG GTGAACAACC AGATCTACGT TAGTGCTTTC 
AGAAAGTTTA TAGCTTTAGG CAAAGGATAT ATCACTAGAT CATAGTCTAA GAACTTTTCC 
AAAATACTAG TGATCCACAT AATTGCCTAC ATACCCCGAA AGGTGGAAGA GGAGCTCAAG 
CGTAGGGGTG AGGAGGTGAA GTTCAAGACC AAGATAGATG CCCTCTTGGA GTTTCTCTCC 
TTATATAAAA CATATTAGTC AGATCTGCGT ATTACAGATC TGACTGGGGT TGAGGCCGTT 
GCTCTCCTTG GGCTTAGAGC TCGAGAGGGA GCTTGGCCTC CTCCAATTCG GACCGGAAGT 
TGGGCTTGAA GCCCGAATAA AACATAAGGG TGAGTATACA TGGAGGCCCC AGTCGCCGGA 
ATAGATGTTT CAAAAGATAA ATTAGTAGTG TACTTCCAAG GTAAATACTA TGAATTTCAA 
AATAATAAGC AAGGTTTTGA AGGAGTAAAG CAAGTCTTGC CAAAGGGTTG CAAAGTTGCT 
ATAGAAAGTA CTGGAATTTA CCACATCAAC TTGGCTAAGT ACTTGGGTAA GGAGTACGAC 
GTGAGGATTA TTAATCCCCT CGTACTCAAG AAGTTCAAGG ACATTAGGGG TAAGAAGAGT 
GATAAGAATG ACGCTAAAAA GCTCGCTGAA CTAGTTATAA GTATGGGCAG TGAGTTTACA 
ACGAGTGAGG CTAAGGAGTC AACAAGCCAA TGGGATTTTA TTACAAGGAG CATTGTTAGG 
GTTAAGAATA GGCTAAGGAG GGATTTAATA CTTCTAGGCT ATAAGGACAG TTTGTCCAAG 
AAGAACTTGA ATGAGGTATT GAGGGGGGAG GATAATATAG TATTATCTGA GGTTAGGTTC 
CTCTTGGACG AGTTGGAGAG GCTTAAGGTT AGGAAGAGGG AGATTGAGGA AGAGCTTGAG 
GATCTTGTTC CTAAGGATAG TTTGATCTTC ACTAGTATTT CCGGAAAGTT CTTAGACTTC 
AATTTTATCT AATCCTAGGT ATGTTATTGC ATTAAGATTA AATCTATACT TATTTTCTTC 
AAAGAACTGT TTAATACAGT TTTTAACGTC TTCTATCGTA TAGAATATTT TATTGCTCAT 
GTAGTTCTTG AGGGACTTGA AGACCGCCTC AGCCATATTA AGCTCAGGCG AGTAAGGAGG 
AGTAAACACG GGATGAATAC CCTTCCTGCG ACAAACCTCA AGCGTACCCT TAGTCTTGTG 
AGGAGAGTAA TTATCCATGA CCATGTAAAC CCTACCACTA CCCACACGCC TCTTAAAGTA 
CCTCAAGAAA TACTTAACGG ATTCAGAGTT AGGCCTTTTA GCAAGAGAAA CCACTACTTC 
GCCGGTCCAA GCGTTTATAG CTAGAATAAC ATAGATTGAG GAAAAACCTA TATTGACGCG 
CATTACGGGC TTACTGCCAA CCTTAGCTAG AACCTTCTTA ATTGACGTGC TAATTACTGT 
CCTACACTCG TCTAGAAAGA ACAGTGCCTT TCTTTCCAAT TTCTTTATTT TTTTTTTTTA 
AAATCTTCCC ACTTGTCCTT TTCTGCTTGG ATGTTGGTGG GTCTGGGTTT TACTAGGTTG 
TATCCTAGTT CGTGGACTAG TTCGTATAGT CTGGATTTCT TGTATTCTAT TCCTTGTTCT 
TGTAGTGCTA TCTTGAGTGT TTTCATTGTC CAATATTCTT GTTGTATTCC GTATTTTTGG 
GGCTTATCTT CCAGAATTTG TTTTATCTTT TCCTCTTCTA CTTTTCTGGG TCTTCCTGAT 
CTGGGCTTGT CCTTTAGTCC ATCAAGACCT TCTTTCTTGT ACTTGCCAAT CCACAATTTT 
ATCGTGGAAT AGCCCTTGTT AAGCATTTTC GAAACTTCTT TCTCCGATTT ACCATCAACT 
ACGTGCAGCT TCACTGCAAG AATCCTCTCC TTAATTCTCG CGTTCTTCTC TTCCTTATAA 
GCTTGAACCA AATCTTGCAT AGTTCAATCT GGTAATACTA ATCTATAAAC TTTTCGGAAA 
CACTAACGAT TCCGGGTATT GGCAGAACGC TGGGTTGTAT AATTTTAGCA AGAGTTGGTG 
ATGTTAAGCG TTTTGGTAAC AAGAAGAGGT TTGTCGCTTA TTGTGGTCTC GATCCTCTTG 
TTGAATCCAG TGGGAAGAGT GTTGTATCGA GAGGCATATC TAGGAGGGGT GATGCTGTTT 
TGAGGAGGGC TTTCTATCTT GCAGCTTTAA CTGCTATCAA GGTTAATCCT ATTATCAAGC 
GTTTTTATGA GGAGCACAAG GAGAATTTGA AGGGTAAGAA GTTGATTATT GCTTGTGCCA 
GGAAGCTTGC TGTTATTACT TGGGCTGTGC TGTATTATAA TAAGCCCTTT GATGCTAGCG 
AGTAAAGCAG GTGACATCAC TTGAATAAGT AGTGTGTACT ATGCTCGATT TTCACTAGTA 
TTTTGGAAAA GTTCTTAGAC TATGATCTAG TGGTATATCC TCTGCCTAAA GCTATAAACT 
TTCTGAAAGC ACTAACGTAC TTTGTTGATT TGTTCAATTT GTCTCATTAA AACGATATTG 
TATAACACTA ATTTTTCAGT AATTAATATT TATTTCAACG TTCCTCTCAA GCTTACACCC 
TAATGCCCGG AGCCCTACCG ACTACAGAAT TCGCCAAGTG AACCATCCAC GCGTAAGCCC 
AGAACTTGAG CTTAGCCTCA ACTACTTGTC CAGCAAAACT TGTCTAACCG ATTCCCCAAA 
AGTACGCTTC ACCGCAGAGA ACAAGGACTC GACCCGCCAC CTAACGCCAT AACCCTTCTC 
CTCCCTCCAA CGATCATAAC CCAACTTCCT AAACTCCCGC ACAGCCTTAC GTCTAGCAAG 
ATGGCCCCTT TTAGTAGAAG CGTTCTTCTT GGGAGGAACT ACAACCTCAA CTCCGGTCTT 
GTAAACCTCA TTGGCGTCAT ATGTCTTATC TCCATAAAAC TTCTTGACCT TCTTTCCCTT 
ATCTTGAAGA TCCTTAACTG TTTTTACAGC GCTTTCAACC TCGTTGCTAG TGACCTCAGC 
GTTTATCACG TTGAATTCGT TATTGTCCAT TACTATCTCG ATCTTGAGGA ATTTTGAATC 
CCTAGTCTTA CCCCACTTGG CAACAATGTA TTGTCCTCCC GTGTTTGTGC TAATGCCTGT 
AGCGTCTGCA ATTACTTCAA GTTCGTCACT TGCCTCGGGG AAGGTTATTT TCATGTTCCT 
CACTCTCTTC CATATTGTTG AGTAATCGAG GCTTGTGGGG ATGATCTTCA ATTGTTCTAA 
GGCTCTTAAT ACTCCTTCTA TTGCTCTGTA AGGTAGGAAG ATGTGGAGGA AGGCTAGGAA 
TTCGTCGAAC TCCTTCGGAG CTTTATACTT TGTCCTAGCG TTCCTGTTCT CCTCTGCTAA 
TAAGTCCCAC CAATGTTCGA ATACGTAGAA GGGGAACATC AACTTATATC TAGTAATGAC 
GTTCTCGTCG TACTTGCTCC AGTCCCTCTT GTACTTACTC TTTCCCATAG GTAATACTTA 
AACGAATAAT TTATAAACTT TTTGTACAAT TCTGAAGCAA TCCACAAAGC AATTTTCACG 
GAAAGGTTTT TATACCGGAA GCTCCCTCTC AAGTTTGAAT GTAAAAGCTA GGGTCTTCGA 
CTCATGGTAC GTGAACTCGA GGACTCTCCA ATGGAATACT GTGGGGGAAC TCAAGTCCAG 
CGCGCGAGTC GTCGAGGGTG GCAGATCCGT GCCCGTTAGC GAGTTCCCCC AAGGGGAGTA 
CCTGGTAGAG TACTTGGGTA CTCCCATAAA GTTACTTGTT ATAGATGATT ATAAGGGTTA 
CGGGAGGAGG TATTTCTTCT CCACCGACCT TAACGACACG GCTGAAGATA TCATAACGAC 
CTGGGAGAAC CGTTGGGACA TAGAGGTCTT GATCAGGGAG CTCAAGGCCT TGGGACTCGA 
GGGTGGGTCC TTCTTGACCT GGGTTAGGAA CTCAGGCTTC GTGGCCTTGA AGGCTCTCTC 
CCTCCTCGTT GTTCAATACT TCAAGTACTC CACGGGTCTG ATGCTCGGGG CCAAAAGGTT 
GGCCAGATTG ATAAAAAGTA TTTACCGTGA GGCGGGTGGG ATCAAAAAAC TGTTCAAGAG 
GAGGAGAAAA CCGTAA 

 

Protein sequence