Gene Ssol_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_2018 
Symbol 
ID0 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand+ 
Start bp1811699 
End bp1812439 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content36% 
IMG OID 
Productproliferating cell nuclear antigen PcnA 
Protein accessionACX92226 
Protein GI261602623 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.169268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAG CTAAGGTAAT TGACGCTGTC TCATTCTCTT ATATATTAAG AACTGTGGGT 
GACTTCTTGA GTGAAGCCAA CTTTATTGTT ACTAAGGAGG GTATAAGAGT TAGCGGAATT 
GATCCTTCAA GAGTAGTTTT TCTAGATATA TTTCTCCCAT CGAGTTACTT TGAGGGATTT 
GAAGTTAGTC AAGAGAAGGA AATAATAGGG TTTAAGTTAG AGGATGTAAA TGATATACTA 
AAACGTGTTT TAAAGGACGA TACGTTAATA CTATCCTCGA ACGAATCTAA ATTAACACTT 
ACTTTTGATG GAGAATTCAC TAGATCTTTC GAGCTTCCAT TAATTCAAGT TGAATCTACA 
CAGCCGCCTT CAGTCAATTT AGAGTTTCCA TTTAAGGCTC AACTACTCAC TATAACTTTT 
GCGGATATAA TTGACGAGTT ATCTGATTTA GGTGAAGTTT TGAATATACA CTCCAAGGAG 
AATAAACTTT ATTTTGAAGT TATTGGAGAC CTCTCCACTG CAAAAGTAGA GTTGTCAACG 
GATAACGGTA CGTTATTAGA AGCTTCTGGC GCAGATGTCA GTAGCAGTTA TGGGATGGAA 
TACGTTGCGA ATACAACTAA AATGAGAAGA GCTTCCGATT CAATGGAATT GTATTTTGGT 
TCTCAAATTC CTTTGAAGCT TCGATTTAAA TTACCGCAGG AAGGCTATGG GGACTTTTAC 
ATTGCACCAA GGGCAGACTA A
 
Protein sequence
MMKAKVIDAV SFSYILRTVG DFLSEANFIV TKEGIRVSGI DPSRVVFLDI FLPSSYFEGF 
EVSQEKEIIG FKLEDVNDIL KRVLKDDTLI LSSNESKLTL TFDGEFTRSF ELPLIQVEST 
QPPSVNLEFP FKAQLLTITF ADIIDELSDL GEVLNIHSKE NKLYFEVIGD LSTAKVELST 
DNGTLLEASG ADVSSSYGME YVANTTKMRR ASDSMELYFG SQIPLKLRFK LPQEGYGDFY 
IAPRAD