Gene Ssol_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_1998 
Symbol 
ID0 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand+ 
Start bp1792918 
End bp1793616 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content36% 
IMG OID 
ProductTatD-related deoxyribonuclease 
Protein accessionACX92208 
Protein GI261602605 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAGT ACTTTGACGC TCATTGCCAT TATTCCTATT TAAAGAAGAA GTATGAAGGT 
TATCTTATAG CTGCGGTTTC AATGGATTAC CAATCCGCTA TGGATACTTT CTCCTTAAAG 
AGTGACAACG TATTAGTAGG AGTTGGTATT CATCCTTGGC GTGTTCATGA GGAGGATCTG 
ACTAGAATTT TATCGTTGAT TATTAAAGCT GATTTCGTTG GAGAAGTTGG TTTGGATTAC 
AGATTCGCTA AGGCTCCTAA AGAATTGCAG ATTAAATATT TTGAGGAGCA GATAAAAGCG 
GGAGAAGGTA AGTTGATAAA CGTCCACGCT TTAGACGCTT GGAAAGACGC TTTCAACATT 
TTAGTTAAAA ACGACGTGAA GAGTGCTATC TTTCACTGGT ATACTGGTCC CATTAATCTG 
TTGAAGGATA TTGAGAGTGC TGGGTATTTT ATTTCTATAA ATCCTTCCGT TTCTTTCCAG 
AAGAAGCATC AAGAAGTGTT GAAAAATGTC GACCTAAAAA ACGTTCTTAC AGAGAGTGAT 
GGTGGGTATG AATATAGGGG TAAGCTATTA GAACCTAGTG ATATACCTAA CGCTATCTCA 
TTTATGAGCA ATTTTTTAGG TATAGAAGAG TATAAGCTAG TGAGAATAAT AAGCAATAAT 
TTTTTCAAAG CTTATGGAGT AAACCCAGTT AATAATTGA
 
Protein sequence
MYKYFDAHCH YSYLKKKYEG YLIAAVSMDY QSAMDTFSLK SDNVLVGVGI HPWRVHEEDL 
TRILSLIIKA DFVGEVGLDY RFAKAPKELQ IKYFEEQIKA GEGKLINVHA LDAWKDAFNI 
LVKNDVKSAI FHWYTGPINL LKDIESAGYF ISINPSVSFQ KKHQEVLKNV DLKNVLTESD 
GGYEYRGKLL EPSDIPNAIS FMSNFLGIEE YKLVRIISNN FFKAYGVNPV NN