Gene Ssol_1915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_1915 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp1703742 
End bp1704977 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content36% 
IMG OID 
ProductPre-mRNA processing ribonucleoprotein, binding domain protein 
Protein accessionACX92126 
Protein GI261602523 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.584841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAT ACCTAATTGA GCATGTTATT GGAGCAGTTG CTTACGATGA AAATGGAAAT 
ATTGTAGACT ATATTACAAA TCCAAGAGAT TTGGGAAAAA TAACTGAGGA ACTATTAAAT
AATGAAAAGG GTATCCCATT CAGCGCAACA GTTGAGTTAT TAAAGAAAGT TAATCCACAA
GAGGTAGTAG TTGAGAACGA AGCTGAAGTT CCTAAATTAC AAGCATTAGG TTATAGGGTT
TCATATGAGC CATATAGCAA GGTTTCGAGA ATATTTAGGG AATCATTACC TAAAGTGGCA
ATAGATATAA AATTTGCAAG CAATGAAGAG GATTATTATA ATTTCCTTCA TGAACTTTCA
CTAGAATATA CCAGAAGAAA GCTGAGGTCT GCGGCACAAA AGAGAGACCT TTTAGCTATT
CAAGCGGTTA GAGCAATGGA TGATATAGAT AAGACCATAA ATCTTTTCTC AGAAAGATTA
AGAGAATGGT ATAGTATTCA CTTCCCAGAA TTAGATAAGC TTATTGAGGA TCACGAGGAA
TATGCAACTA TAGTATCTAG GTTTGGTGAT AGGGGGTTTT TAACTATTGA TAGTTTAAAG
GAATTGGGTT TCAACGAGCA AAGGATAAAT AGGATCCTTG ATGCAGCAAA GAAAAGTATA
GGTGCAGATA TTTCAGAAGA CGACTTATCT GCAATGAGGA TGATTGCGAA CACTATTTTA
GACTTGTATA ATATTAGGAG AAATCTTAAT AATTATCTAG AAGGTGTAAT GAAAGAAGTT
GCTCCAAATG TAACAGCCTT AGTGGGTCCA GCATTAGGTG CTAGATTATT GAGTATAGCA
GGGAGTTTAG ATGAATTAGC TAAAATGCCA GCTAGTACTA TCCAAGTATT GGGAGCGGAA
AAGGCCTTAT TTAGGGCGTT AAGAAGTGGC GGAAGGCCAC CCAAACATGG TATAATATTC
CAGTACCCTG CTATTCATAC ATCACCTAGA TGGCAAAGGG GTAAGATTGC CAGAGCTTTA
GCAGCTAAAT TAGCAATAGC TGCCAGAGTA GATGCTTTTA GTGGTAGATT TATAGGCGAT
CAACTAAATG AACAGTTAAA GAAGAGGATA GATGAAATTA AAGAGAAATT TGCGCAACCA
CCACCTAAAA AGCCGCAACA ACAAAAGCCA CAGCAACCAC AAAAACAGCA AGCAAAAGGT
AAAAAAGGTG GAAAGAGAAG AGGTAAAAGA AAGTGA
 
Protein sequence
MKIYLIEHVI GAVAYDENGN IVDYITNPRD LGKITEELLN NEKGIPFSAT VELLKKVNPQ 
EVVVENEAEV PKLQALGYRV SYEPYSKVSR IFRESLPKVA IDIKFASNEE DYYNFLHELS
LEYTRRKLRS AAQKRDLLAI QAVRAMDDID KTINLFSERL REWYSIHFPE LDKLIEDHEE
YATIVSRFGD RGFLTIDSLK ELGFNEQRIN RILDAAKKSI GADISEDDLS AMRMIANTIL
DLYNIRRNLN NYLEGVMKEV APNVTALVGP ALGARLLSIA GSLDELAKMP ASTIQVLGAE
KALFRALRSG GRPPKHGIIF QYPAIHTSPR WQRGKIARAL AAKLAIAARV DAFSGRFIGD
QLNEQLKKRI DEIKEKFAQP PPKKPQQQKP QQPQKQQAKG KKGGKRRGKR K