| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssol_1536 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfolobus solfataricus 98/2 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | CP001800 |
|---|
| Strand | + |
|---|
| Start bp | 1403022 |
|---|
| End bp | 1404635 |
|---|
| Gene Length | 1614 bp |
|---|
| Protein Length | 537 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | |
|---|
| Product | DEAD_2 domain protein |
|---|
| Protein accession | ACX91763 |
|---|
| Protein GI | 261602160 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.849616 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATAA CTTTGAGGGA ATGGCAGAAG CAGAAATTCG ATGAGGCATT AAACGCATTA
AAGACCAAAA AGACGCTATT GCTTAACGTG ACTACTGGAG CGGGAAAGAC GTTATTTACG
CTCATGCTAG GGAAAGCCTT ACGTAAAAAA GTATTATTCC TCACAAGGAC ACACAGCGAA
TTTGAAGCTG TTAGGAGAGA GGCTGAAAGG TTAGGGCTTA AAGTGGCCTA CCTCTTCGGC
AAGAACTCGG TATGCCTTTA TGCTACTGAC GATGTTAAAC CCGAAGACAT AGAGTGCAGG
GAATGTTCAT TGAGGGACAA AGTGAAGGAC TTGAGCGGAT TAAGGCCATC TCAAATACTC
CAGTTAAGTA AAGACGCTTC AGATTTCTGC CCCTACCACT CCTTAAGGGC TTTAATAAGT
AAGGCTGACG TAATAGTAGC TTCCTACATG TACTTCTTCA ACCCCTTTCT GAGGAGGAAG
ATAATATGCG GTTCCCCGGA TTGCGTTAAG CCCGAGGAGC TTTTAGTGAT TGTGGATGAA
GCTCATAACC TAATTTCCGC TGACGAGTGG TTCTCTAAAA AGATAGGTAA GAAGAGCGTG
AGTAACGCTT TAAAGGAAAT TGAGGTGGTA GAAAGTAATA CTAACAACGA TTTAACAGAT
GCTAAGAATT TCCTCGGAGA ACTGAGTAGG TTTTTGGAGA ACATAACCGA TGAGGGAGGC
TGTAAAGAAT TACCATTATA TCCTAAACCT TCAGCAGAAG CCTTACTGCA GATACACAGG
GCTTCCTTAT CCTATCTTAA CATGATAAAG GGACCTATTA AGAGGTCATA TTTGAGGTCC
ATATACGATT TCTTCAATAC GGAAGGAGAG ATGTTCAACT GTAACGGGAG GCTTATTATA
GTCCCTTTGA ACCCCTTGGA AATGATAAAG AGTTCTTTCA ACTTTGCGGA TATGAGGGTG
TTGATGAGCG GTACATTGCC CAACCTGGGT TTAGAAGCGC ATAAGATAGA CGTTGAAGTT
AGGTTAGGTA GGTCTGAACA CTATTACTGT AATTCCGTTA ATTCCAGAGT TAAGTATAGG
AGGGCTAACG CCGAGAAGTA TGCGGAAATA ATAAAAAAGG TGTATAATGA CTCCTCTTCC
AGTGTCTTAG TTTTCTTTCC AAGCTATGAT TTTAAGGGTG AGGTAAAGAA ATACCTTAAC
GGTTTGCCTA CGTTAGAGGA GAGTAAGAGG GTAACCCATG AGGAAATCTT AGAGTTAATG
AAGGGTGGGA AATACGCAGT ACTTTTGGTT ATGAGGGCGA AAGAAAGTGA AGGTGTTGAG
TTTAGAGATG AGGCTAATAA GAACTTATTT AGCGATATGA TACTAGCTGG ATTGCCTTAT
CCAGATATTA GCGACGCTTT AGTTAGGAGG AGGATTAGGA AACTTTCTGA AGGTACTAAG
AGGAGTGAGG AGGAAGTAGC TCACGAACTT ACGTTAATTA CCATAAAACA GACAATAGGT
AGAGCGTTTC GTGACCCTAA TGACTACGTT AAGATATATT TGTGTGATTC AAGGTATAAG
GAGTACTTTC CGAATTTAGG ATTGAAGGAA AAAGAGATTA AGCTTTTTGT TTAA
|
|---|
| Protein sequence | MEITLREWQK QKFDEALNAL KTKKTLLLNV TTGAGKTLFT LMLGKALRKK VLFLTRTHSE
FEAVRREAER LGLKVAYLFG KNSVCLYATD DVKPEDIECR ECSLRDKVKD LSGLRPSQIL
QLSKDASDFC PYHSLRALIS KADVIVASYM YFFNPFLRRK IICGSPDCVK PEELLVIVDE
AHNLISADEW FSKKIGKKSV SNALKEIEVV ESNTNNDLTD AKNFLGELSR FLENITDEGG
CKELPLYPKP SAEALLQIHR ASLSYLNMIK GPIKRSYLRS IYDFFNTEGE MFNCNGRLII
VPLNPLEMIK SSFNFADMRV LMSGTLPNLG LEAHKIDVEV RLGRSEHYYC NSVNSRVKYR
RANAEKYAEI IKKVYNDSSS SVLVFFPSYD FKGEVKKYLN GLPTLEESKR VTHEEILELM
KGGKYAVLLV MRAKESEGVE FRDEANKNLF SDMILAGLPY PDISDALVRR RIRKLSEGTK
RSEEEVAHEL TLITIKQTIG RAFRDPNDYV KIYLCDSRYK EYFPNLGLKE KEIKLFV
|
|---|
| |