Gene Ssol_1288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_1288 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp1192823 
End bp1194475 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content31% 
IMG OID 
ProductDEAD_2 domain protein 
Protein accessionACX91524 
Protein GI261601921 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAACTTA GAGAGTGGCA AAGCAAAATA GCTGAGAAAA TTGTAGAAGC ATTAAGAAAT 
AATTTTTTAG TTTCATTGCA AGCTCCTACG GGTAGTGGTA AGACTTTATT TGCACTTTAC
ACTGCTCTTA AGGTTAAGCC AAAAGTAGCG TTTGTTGTAA GAACTCATAA CGAATTTTTC
CCAGTTTACA GAGAACTATC TTTACACTTT AAGGATAAAA AATACGGATT TTTAGTAGGT
AAATCCTCTG CGTGTGTTTT TAGTTCATCT GACGTTGATG CTCAAGATAT ATATTGTAAT
GGATGTGAAA TTTTTAACGC GTCCGCAGTT ACCGTAACTG ATTCGCCAAA GGTAAGTCTG
AATAAGCTAA AGGAGGAGGG TAAAAAATTA GGATTTTGCC CTTATTATTC TCTTCTGGAG
ACCATAAAAA CCGCTGATGT GATATTACTC ACATATCCTT ATCTGTTTAT ACCTTGGCTT
AGAGAATCTT TAGATATTAA TTGGGAGGAC TATGTTGTTA TAGTAGACGA GGCTCATAAT
ATAGAGAACG TTTCTAATAT AGAAGAGAAA AAACTAAACA AAAGAATTAT AGAGATGGCA
ATTTCCCAAT CTCACTCACA AAATGTGAAA GTAATATTGG AAAGACTTAA GGAAAATGTT
GAAAAGGCAG TTTATTCAGA GGATAAATAT ATACTTATTG AAAAGGATAA ATTAGACAAT
ATACTACCTT CTAATGAAGA AATCGAGATT TTATCGGAAG AATATGATGA AATTAGGAAG
ATTATGATAA AAAATAAGAC GGTAAGTAGG AATTATCTCG GATCGATTTT GAGGTTTTTT
GATTTAGTTA ATGATGAAGG AATTAGAGTT TTTTCATATT CTGGTTCCTT GATTGCAAAA
TATATAATAC CCTCTTACTT TACTGATATA CTTAACGATG AGAAAATTAC GTATATGCTG
ATGTCCGGTA CTATGCAACC CTTAGATTAT CTTAGAAATA TTATAGGAAT TAAAAGGAAA
ATATTATATA TTGATGCAGA AAAGGTTATG AAAAAAAGAT TAACTGGGAC ATATGAGTGT
CTTATATCTA TTGATGTTAC AACTACTTAT AGTTTAAGAT CGGAACAAAT GGCACGTAAA
TATGCATCAT ATTTACTAAA AATTTTCTAT AATTCTAGAA GACATGTTCT AGCTATATTT
CCTAGCTATG AATTTATGAG AATAGTATCT AAATTTCTAA ATATAAGATA TTTGGCAGAA
GATACAGAAA CTAGTATCGA AGAGATAATG AGCAATCTGA AAAAAGAAAA AACAATTATC
ATGGGTATAG CAAGGGGTAA GTTAGCTGAA GGAATTGAAA TAGTTGAAAA TGGATCTAGT
CTAATATCAG ATGTGGCAAT GGTAGGTATC CCTTATCCTC CAATAGATGA TTACTTAAAG
ATACGAGTTG AGGAGATATC AAAAATCTTG AAAAAGGATA TTAGTAACGA ATTAATCAGT
ATACAAGCAT TAATTGCTGT AAAACAATCC ATAGGTAGGG CCATAAGGGG TCCAACGGAT
AATGCAACTA TATGGCTTCT TGATAAAAGA TATGATAGTC TATGGTGGAA GAAAGAACTT
AATTGCTTGA ATGCAAGGAA AATTAAACTG TGA
 
Protein sequence
MELREWQSKI AEKIVEALRN NFLVSLQAPT GSGKTLFALY TALKVKPKVA FVVRTHNEFF 
PVYRELSLHF KDKKYGFLVG KSSACVFSSS DVDAQDIYCN GCEIFNASAV TVTDSPKVSL
NKLKEEGKKL GFCPYYSLLE TIKTADVILL TYPYLFIPWL RESLDINWED YVVIVDEAHN
IENVSNIEEK KLNKRIIEMA ISQSHSQNVK VILERLKENV EKAVYSEDKY ILIEKDKLDN
ILPSNEEIEI LSEEYDEIRK IMIKNKTVSR NYLGSILRFF DLVNDEGIRV FSYSGSLIAK
YIIPSYFTDI LNDEKITYML MSGTMQPLDY LRNIIGIKRK ILYIDAEKVM KKRLTGTYEC
LISIDVTTTY SLRSEQMARK YASYLLKIFY NSRRHVLAIF PSYEFMRIVS KFLNIRYLAE
DTETSIEEIM SNLKKEKTII MGIARGKLAE GIEIVENGSS LISDVAMVGI PYPPIDDYLK
IRVEEISKIL KKDISNELIS IQALIAVKQS IGRAIRGPTD NATIWLLDKR YDSLWWKKEL
NCLNARKIKL