Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_1179 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | + |
Start bp | 1097905 |
End bp | 1099746 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | |
Product | Protein of unknown function DUF460 |
Protein accession | ACX91417 |
Protein GI | 261601814 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.237227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAA TGGGAATTGA TATAGAGGCG ATGGAAAGCC CATCCTCTAA GTCACAGCCA TTATATTCAG TTATTATTAT TGACGAGAAC GAAAAAATAG TCTATAAGGC GGAAAACGTA AGTTTAAGTA GAGTTATTAG GTTATGTTGG GAATACAGCA TTGATATACT AGCGACTGAC AATATTTACG AACTAGGAGA AAGTGATAAA GAGATTATTA ATATCGTGAA ATTATTGCCG CCAAATACTA ACATAGTTCA AGTTACATAT CATAATGGAG AATTTAAGCA AATAAAGGAA TTGGCTAGGG AAATAGGATA CGAAGTGCAA GGAAAATTAT CCCCGCAAAA AACTGCATAT TTAGATGCAT TATTAGCTTT AAAAGGATTT GGAACCAGTA TAAAAATTGA AGAAAAACGT ACTAAAATAG TAGTGTCAAG GGGAAGAGCA TTAGGCCCTG GTGGAATGAG CCAAAATAGA TATAAGAGAT ATATAAGGGG AACCCTTCTC AGAGTAGCTA AGGAGATAAA GGAAAAACTT GATATGAAAG GATTTGATTA TGATATGATA GTAAGGAGAT CAAGAGCAGG TATTGAGGGA GCCGTATTCA TAGTTTATAC TCCCAGAGAG AGACTCTACG GAATTATAAG AAAAATGAAA GGTCATGACG TAGTAGTAGA TATTAAGCCA ATATATAAAA ATAGGATTGA ATTTAAAGAC AAAAGAACTG AAAGGAGATT AATTGTTGGA ATAGACCCTG GTATAGAAGT TGGTCTATCA ATAATTGATA TCTACGGTAA ACCAATTTTA TTGTTATCAA GAAGAAATAT TGATAGAGAC GAAATTGTAA CCTTGATCTC TAAAGAGGGG AAAGCAATAA TAGTAGCGAC AGATGTTAAT CCACTACCAG ACACTGTAAA AAAGATCGCT AGTAAATTTA ACGCCAAAAT ATTCATCCCG GAAAAAAGTC TAAGTATAGA TGAAAAACAA AGACTTATTG ACGAGTACTC TAAGTTACAT AAGCTAAAAA TAGATAATCC TCACATTAGA GACTCTTTAG CTGCAGCTCT AAAGGCATAT AATGAAATTG AGAACAAATT AAGACAAATT GAGAGTTTCA TCAGTAGATT AGATATTGAT ATAATGGATG AAAATCGTAT ATACGATTGC GTAATATTTG GTAATACGGT ATCTGAATGC GTAGAAAAGG AAATTGAAAA AATCATAGGA AAAGATGATT ACAGGAAAAT CGAGGAGATA CAAAAGGAAA ACGATACAAC TAAAAATACA AATAAACTAA CTAAGTTAGA AGAGGAAAAT AGAGAGCTAA AATCAGAACT AATACGTTAT AAAAGGATAA TTTATAATCT CATCAATGAA AGAGATTCAT TAATAAGGAA AATTGATGAT ATTAAACTAC AGATTAATAA GGAAATAGAG AGAGACAGGA AAATTTACGA ACTAAATCTA AACCTACAGA ATGCGTACAA GGTAATAAGT CAACTTGAGA ATAAATTAAA TTATAATGAG AAACAAATTG AGAAACTAAG GGAAGTGCTA TATAAACTGT TAAATGGAAA GGCAATAGTA GTTAAGAAGG ATAGTAGAGT TGGCGATATA GCATTTGATG GAAATAACAT CTATATTGGA GAGGAAAAAG TTAACAATGA GATAGCGGAA TACGCAGATA AGGAGATTAT AATATTAGAT AAACAGCTCT TGAACGATCT GGAAGTATTA CGTAAAGAAC TACAAATAGA AAGGTCTAAG AATATTGATA TAAAAAGAAT AATTGACGAG TATAGAAATA AAAGGTTAAA AGAGAGTAGC TTTCCCTTCT AA
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Protein sequence | MKIMGIDIEA MESPSSKSQP LYSVIIIDEN EKIVYKAENV SLSRVIRLCW EYSIDILATD NIYELGESDK EIINIVKLLP PNTNIVQVTY HNGEFKQIKE LAREIGYEVQ GKLSPQKTAY LDALLALKGF GTSIKIEEKR TKIVVSRGRA LGPGGMSQNR YKRYIRGTLL RVAKEIKEKL DMKGFDYDMI VRRSRAGIEG AVFIVYTPRE RLYGIIRKMK GHDVVVDIKP IYKNRIEFKD KRTERRLIVG IDPGIEVGLS IIDIYGKPIL LLSRRNIDRD EIVTLISKEG KAIIVATDVN PLPDTVKKIA SKFNAKIFIP EKSLSIDEKQ RLIDEYSKLH KLKIDNPHIR DSLAAALKAY NEIENKLRQI ESFISRLDID IMDENRIYDC VIFGNTVSEC VEKEIEKIIG KDDYRKIEEI QKENDTTKNT NKLTKLEEEN RELKSELIRY KRIIYNLINE RDSLIRKIDD IKLQINKEIE RDRKIYELNL NLQNAYKVIS QLENKLNYNE KQIEKLREVL YKLLNGKAIV VKKDSRVGDI AFDGNNIYIG EEKVNNEIAE YADKEIIILD KQLLNDLEVL RKELQIERSK NIDIKRIIDE YRNKRLKESS FPF
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