Gene Ssol_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_1179 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp1097905 
End bp1099746 
Gene Length1842 bp 
Protein Length613 aa 
Translation table11 
GC content31% 
IMG OID 
ProductProtein of unknown function DUF460 
Protein accessionACX91417 
Protein GI261601814 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.237227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA TGGGAATTGA TATAGAGGCG ATGGAAAGCC CATCCTCTAA GTCACAGCCA 
TTATATTCAG TTATTATTAT TGACGAGAAC GAAAAAATAG TCTATAAGGC GGAAAACGTA
AGTTTAAGTA GAGTTATTAG GTTATGTTGG GAATACAGCA TTGATATACT AGCGACTGAC
AATATTTACG AACTAGGAGA AAGTGATAAA GAGATTATTA ATATCGTGAA ATTATTGCCG
CCAAATACTA ACATAGTTCA AGTTACATAT CATAATGGAG AATTTAAGCA AATAAAGGAA
TTGGCTAGGG AAATAGGATA CGAAGTGCAA GGAAAATTAT CCCCGCAAAA AACTGCATAT
TTAGATGCAT TATTAGCTTT AAAAGGATTT GGAACCAGTA TAAAAATTGA AGAAAAACGT
ACTAAAATAG TAGTGTCAAG GGGAAGAGCA TTAGGCCCTG GTGGAATGAG CCAAAATAGA
TATAAGAGAT ATATAAGGGG AACCCTTCTC AGAGTAGCTA AGGAGATAAA GGAAAAACTT
GATATGAAAG GATTTGATTA TGATATGATA GTAAGGAGAT CAAGAGCAGG TATTGAGGGA
GCCGTATTCA TAGTTTATAC TCCCAGAGAG AGACTCTACG GAATTATAAG AAAAATGAAA
GGTCATGACG TAGTAGTAGA TATTAAGCCA ATATATAAAA ATAGGATTGA ATTTAAAGAC
AAAAGAACTG AAAGGAGATT AATTGTTGGA ATAGACCCTG GTATAGAAGT TGGTCTATCA
ATAATTGATA TCTACGGTAA ACCAATTTTA TTGTTATCAA GAAGAAATAT TGATAGAGAC
GAAATTGTAA CCTTGATCTC TAAAGAGGGG AAAGCAATAA TAGTAGCGAC AGATGTTAAT
CCACTACCAG ACACTGTAAA AAAGATCGCT AGTAAATTTA ACGCCAAAAT ATTCATCCCG
GAAAAAAGTC TAAGTATAGA TGAAAAACAA AGACTTATTG ACGAGTACTC TAAGTTACAT
AAGCTAAAAA TAGATAATCC TCACATTAGA GACTCTTTAG CTGCAGCTCT AAAGGCATAT
AATGAAATTG AGAACAAATT AAGACAAATT GAGAGTTTCA TCAGTAGATT AGATATTGAT
ATAATGGATG AAAATCGTAT ATACGATTGC GTAATATTTG GTAATACGGT ATCTGAATGC
GTAGAAAAGG AAATTGAAAA AATCATAGGA AAAGATGATT ACAGGAAAAT CGAGGAGATA
CAAAAGGAAA ACGATACAAC TAAAAATACA AATAAACTAA CTAAGTTAGA AGAGGAAAAT
AGAGAGCTAA AATCAGAACT AATACGTTAT AAAAGGATAA TTTATAATCT CATCAATGAA
AGAGATTCAT TAATAAGGAA AATTGATGAT ATTAAACTAC AGATTAATAA GGAAATAGAG
AGAGACAGGA AAATTTACGA ACTAAATCTA AACCTACAGA ATGCGTACAA GGTAATAAGT
CAACTTGAGA ATAAATTAAA TTATAATGAG AAACAAATTG AGAAACTAAG GGAAGTGCTA
TATAAACTGT TAAATGGAAA GGCAATAGTA GTTAAGAAGG ATAGTAGAGT TGGCGATATA
GCATTTGATG GAAATAACAT CTATATTGGA GAGGAAAAAG TTAACAATGA GATAGCGGAA
TACGCAGATA AGGAGATTAT AATATTAGAT AAACAGCTCT TGAACGATCT GGAAGTATTA
CGTAAAGAAC TACAAATAGA AAGGTCTAAG AATATTGATA TAAAAAGAAT AATTGACGAG
TATAGAAATA AAAGGTTAAA AGAGAGTAGC TTTCCCTTCT AA
 
Protein sequence
MKIMGIDIEA MESPSSKSQP LYSVIIIDEN EKIVYKAENV SLSRVIRLCW EYSIDILATD 
NIYELGESDK EIINIVKLLP PNTNIVQVTY HNGEFKQIKE LAREIGYEVQ GKLSPQKTAY
LDALLALKGF GTSIKIEEKR TKIVVSRGRA LGPGGMSQNR YKRYIRGTLL RVAKEIKEKL
DMKGFDYDMI VRRSRAGIEG AVFIVYTPRE RLYGIIRKMK GHDVVVDIKP IYKNRIEFKD
KRTERRLIVG IDPGIEVGLS IIDIYGKPIL LLSRRNIDRD EIVTLISKEG KAIIVATDVN
PLPDTVKKIA SKFNAKIFIP EKSLSIDEKQ RLIDEYSKLH KLKIDNPHIR DSLAAALKAY
NEIENKLRQI ESFISRLDID IMDENRIYDC VIFGNTVSEC VEKEIEKIIG KDDYRKIEEI
QKENDTTKNT NKLTKLEEEN RELKSELIRY KRIIYNLINE RDSLIRKIDD IKLQINKEIE
RDRKIYELNL NLQNAYKVIS QLENKLNYNE KQIEKLREVL YKLLNGKAIV VKKDSRVGDI
AFDGNNIYIG EEKVNNEIAE YADKEIIILD KQLLNDLEVL RKELQIERSK NIDIKRIIDE
YRNKRLKESS FPF