| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4507 |
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| Symbol | |
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| ID | 5612437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5513867 |
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| End bp | 5514634 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640935484 |
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| Product | hypothetical protein |
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| Protein accession | YP_001476237 |
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| Protein GI | 157377637 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000275437 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCCACCAA GTAGCTCCAC TCATATTCAA GTTGGCCTTC AATCAGGCTC TCAAGCCGAA
CGAAGAGTGA TGACTAAGGT CTTTATCATT GGCTTGCCCC GTACCGGGAC GACGAGTGTG
AGTGTGGCCT TGCTTGAGCA GGGATATAAG GTGGCGCATC AGGCCTTTAC CAAGCAGGCG
TTTGAGTTGG CGGATGTGAT ATCCGATGCC CCCTGTTTCA GTGATTACAG GCAGCTGGAT
AAGCAGTTTT CCGGCGCTAA ATTTGTCTAT CTGGATCGGT CTCTCGACAG TTGGGTGCCG
TCGATGCAGA TGTTACTGAG TCGCATGCTA GTGCATCTGG ATGACAAGAC GGGTCGGTTT
AACGTTATCC TGAAGCGCAG CTTTAACCAC TGCTTTGGAG TGAACAGGGT AGATAACACC
ATGGATACTG AGCACCTTAT CCGGTGTTAC CACGCCCACA GAGAGCAGGT TTTCGAATAC
TTCAGGGGGA GAGACGATCT TCTCAGTATC GATATCAGTG AGCCGGGAAG TTTATCTAAG
CTGATAAACT TCTTAGAGTC AGATAATGAC TCTATCGATT CAAATATTTT AGATCAGGGC
TTTCCTCATT TGAACTTTCC GCATTTAAAC AAGGGAAGAA ACGTTGCCAG TTGGGATGAA
TACAAGCACC CCAATAAGAT CAGCGCTAAC GCCGCCGGCC CTGAAAACCG CAAATACTTC
GATTATAAGT TAGCCGATCA ACCTTCCAAC CTCTATTTCA ACAATTAG
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| Protein sequence | MPPSSSTHIQ VGLQSGSQAE RRVMTKVFII GLPRTGTTSV SVALLEQGYK VAHQAFTKQA
FELADVISDA PCFSDYRQLD KQFSGAKFVY LDRSLDSWVP SMQMLLSRML VHLDDKTGRF
NVILKRSFNH CFGVNRVDNT MDTEHLIRCY HAHREQVFEY FRGRDDLLSI DISEPGSLSK
LINFLESDND SIDSNILDQG FPHLNFPHLN KGRNVASWDE YKHPNKISAN AAGPENRKYF
DYKLADQPSN LYFNN
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