| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4440 |
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| Symbol | |
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| ID | 5611469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5426839 |
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| End bp | 5427408 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640935410 |
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| Product | phospholipid/glycerol acyltransferase |
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| Protein accession | YP_001476170 |
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| Protein GI | 157377570 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.439449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCATTGA GTTTTTATAT GTTTCAACAA TTTTGCAAAT TAGTTTTGAA GTTAACTGGC
TGGACTATCT CAGGTACGCT ACCCACCGAC AGCCAGTTTG TCGCTATCGT TGGTCCACAC
ACCAGCAACT GGGACTTTAT CATAGGCGTA CTGGCACGAG GAGCATTGGG AGCGAAGGTC
AACTTTCTCG GGAAACATCA ACTATTTATG CCACTTTGGG GATGGTTTTT TAAAGCCGTC
GGCGGCAGGC CCGTTGACCG GACTAAGAGC AATAATTTAG TCGATGCAGT CGTACAAATC
TTCAATTCAG ATCCCGACTT TAGTTTGGCG TTAGCGCCGG AAGGCACCAG GAGCCCGGTA
AAACGCTGGA AGACCGGGTT TTACCATATT GCGAGCAAGG CTAATGTACC GATAATTACC
GTAGGTTTAG ATTTTGGCAA TAAAACGGTG ATAATCCCGC AAGGTACCCC AACCACCGAC
GATATGCAGC AGGATATGGA TCAGATTATC GCCTTTTATC GCGCTATCAA GGGTCGCCAC
ACTAAGGTTA TACCCGATTT CCAGCCCTGA
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| Protein sequence | MALSFYMFQQ FCKLVLKLTG WTISGTLPTD SQFVAIVGPH TSNWDFIIGV LARGALGAKV
NFLGKHQLFM PLWGWFFKAV GGRPVDRTKS NNLVDAVVQI FNSDPDFSLA LAPEGTRSPV
KRWKTGFYHI ASKANVPIIT VGLDFGNKTV IIPQGTPTTD DMQQDMDQII AFYRAIKGRH
TKVIPDFQP
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