| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4431 |
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| Symbol | |
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| ID | 5609639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5415374 |
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| End bp | 5415937 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640935401 |
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| Product | chorismate lyase |
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| Protein accession | YP_001476161 |
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| Protein GI | 157377561 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000175928 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGTGA CTAGGTTAAG CTTCCCCTAT GGTGAATCAA TTCAGTGGTT TTCACCAGAA
AAAACCATCG ATCTTCCCAA ATCACCTTTA ACCGATTGGT TACTTTCATC TGAGAGTTTA
ACTCAAAAAT TACGCTCTTA CTGTGATGAA TTTGAAGTTA AGGTGCTCGG TGAAGGAACA
TTAGTCCCAT TCGATAACGA ATTTCCAAAT CAGAACAAGG TGTGGGTCCG CGAAGTCCTG
CTCTGTCTGG ATGGTACCCC CTGGATTTTT GCCCGAACCT TAATTCCGGG TAGCCTGCTG
GATAAGAAAA AAAACGAGCT GTTAAACCTC GGTACTCGCC CACTGGGTGA GCTGCTTTAT
ACCAACAATG AGTTTACGCC GGGTAAGATT GAGGTCGCGC ATTTCACCCC TTGTCAGAAG
CTGGCTGAAC TGACCAAATC TCTCCACCAG CCTCTCACTC AAGAGTTGTG GGGGCGTCGA
CGCTATTTCT CCTATCAAGG CGAGCAGCTT ATCGTCGGTG AGACCTTCCT GCCCGCAGCC
CGTCAGGCGA TTGAAAGACT ATAA
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| Protein sequence | MSVTRLSFPY GESIQWFSPE KTIDLPKSPL TDWLLSSESL TQKLRSYCDE FEVKVLGEGT
LVPFDNEFPN QNKVWVREVL LCLDGTPWIF ARTLIPGSLL DKKKNELLNL GTRPLGELLY
TNNEFTPGKI EVAHFTPCQK LAELTKSLHQ PLTQELWGRR RYFSYQGEQL IVGETFLPAA
RQAIERL
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