| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4422 |
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| Symbol | |
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| ID | 5610524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5406153 |
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| End bp | 5406353 |
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| Gene Length | 201 bp |
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| Protein Length | 66 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640935392 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_001476152 |
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| Protein GI | 157377552 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02811] formate dehydrogenase region TAT target |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAAGC AAGCTTCCGA TATGGGTCGT CGTCAATTGC TAAAGGCATT GGCAGTCGGC
AGTGCGGCTG GTGCAGTTGC AACTGTCAGT GGACAAGCTC TTGCTGCATC ACCAAGCGTT
GAACCAACAA CAGCTAAAGG TGATGGTTAT CAAGAGACTG ACCATGTTCG CAGTTATTAC
GCGTCATTAC GTACCAAGTA A
|
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| Protein sequence | MKKQASDMGR RQLLKALAVG SAAGAVATVS GQALAASPSV EPTTAKGDGY QETDHVRSYY
ASLRTK
|
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