| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4385 |
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| Symbol | |
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| ID | 5610819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5368546 |
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| End bp | 5368830 |
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| Gene Length | 285 bp |
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| Protein Length | 94 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640935355 |
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| Product | hypothetical protein |
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| Protein accession | YP_001476115 |
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| Protein GI | 157377515 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5572] Predicted integral membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0150663 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACTCTA CTAACAAAGC TCTCGGATTA ACTGTGGCAG GTATTTTGGC TGCGGGAATA
TCCATGGGGG CTAACGCGGT TCCAGAACAG CCCACGCAGT GGGAAAAATG TGCAGGTATT
GCCAAGGCTG GGGCAAATGA TTGTGGTGCA CTCGATGGCA GTCATGGCTG CGCCGGACAA
GCTAAGTCTG ACAACTTACC CAATGAGTGG GTCTATGTGC CTGCCGGAAC GTGTGAAAAG
ATCACTGGCG GCGTCATTAA AGCCGTGAAA CCGGCTAAAT CCTGA
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| Protein sequence | MNSTNKALGL TVAGILAAGI SMGANAVPEQ PTQWEKCAGI AKAGANDCGA LDGSHGCAGQ
AKSDNLPNEW VYVPAGTCEK ITGGVIKAVK PAKS
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