| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4375 |
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| Symbol | |
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| ID | 5610471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5357367 |
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| End bp | 5360483 |
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| Gene Length | 3117 bp |
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| Protein Length | 1038 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640935345 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001476105 |
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| Protein GI | 157377505 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000150121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.679218 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTGA CTCGAATAAG TACCCATAAT CCCGCAGGCA CCTTAGTCAC CTTATTGCTG
ATCGCCATTT TTGGTGCCCT GGCCATCGCC AAGTTACCTA TTCAGTTACT GCCCGATATT
CAGCGTCCAC AAATTTCAGT TTTCAACAAC TGGCGCTCAG CGGCGCCGCA GGAGATGGAA
TCTAACATCA TAGAACCTCA GGAGAATGTC CTTAGACAGG TTCCCGGTGT GGTAGAGATG
ACATCTAATA TCTCTCAAGG ATTTGGTCGG GTCTCATTAA CTTTTGAGGT GGGAAGCAAT
ATGCAAGAGG CGATGATCAA TGTGATCAAC GCCCTCAATC AAACCCCGCC TCGCCCGCTG
GATGCCAATG AGCCCTTTAT TAATGTCGGT GGCGGCAGAG GCACACCTAA TCTGGCCTCA
TTACTCATTC GTATGGCACC CGATAACCCG GATACCGATT TCGCAAAGTA CCAAAAACTG
ATCGACGATA TTGTAGAGCC CAGACTCAGG CAGATAACCG GTGTCGGGAG CGTACAACTG
CAGAGCCGAC GCCCTAAAGA GCTGCACATT CTGTTTGATC CTTATCGCGC GGCCGCACTG
GGTATCACAC TGGAGCAGCT GCGGAATACC TTATCACGTG CCGCCGACAT CTCAGGCGGT
ACGGCAAACG TAGGTCGTCG CCAATACATG GTGAGGTTTA TCGGCCAATA CACGCCGGAG
AATTTAGGTA ACCTAATCGT CACCTATAAC GATGGGCGTC CGGTGTACAT CAACGAGCTC
GCCGACGTCG CAGTTTCAAG CGCCGAGGTT CAGGGCTTTA CTAAGCGTAA TGGCTATCCG
GCCTATTATA TGACTATCGA AGGTACCTTC GATGCCAATA CCGTTACCGT ACTCAACGGT
GTGAACGACG CTATCGACGA ACTGAATGCC GGAGCCTTGA AAGAGGCAGG CCTGGTCATG
GACCTCTCTT TCGATGCCTC CATACATATC AAACGCGCCA TCTTATTGGT TAAAGGCAAC
TTGGCGATAG GGGTACTATT AGCCTTAGTG ATCCTGTTTG CCTTCCTGCG CAGCTTCCGC
GCGACCTTAA TGATCGCCTC GACTATTCCT GTCGCACTAC TCATCGCCTT CTTCTCTCTC
GAGGCCATGG GACGCACCTT GAATGTGATC TCTCTGGCTG GCCTTGCCTT TGCCGTCGGC
CTGGTGCTCG ACGCCGCCAT TATCGTTCAG GAAAACATAG TACGACTTCT GCAGCAAGGC
AGCAGGCTCA GACAGGCAAT TGAGGAGGGC ACCGGACAGG TAAAGGGTGC ACTCATGGCG
TCGACAGCCA CCACGGTCGC CATTTTTGTT CCTATACTCT TTATGCCCGG AGTGGAGGGG
CAACTCTTCT CCGACCTGGC CCTCACACTC TCTGTTGCCG TAGTCTCATC CTTTATCAGT
GCGATCACCT TAATTCCGGT CTTTAGTCTA TTGTGGCTAA AACTCCCCGG GAAAGCGGCC
CCACAGATGA ACAGACCGAA CTTATGGTCC AAACTGACTC GGCTTATTCG TACGCTCACC
GGTGATAAGA AGCGGGCCAC AATCTGGTGT GCCCTACTGA TCATCGGCAG TGGCATCATG
ACCTTTGCAC TGATGCCACG TCCGGACTTT CTGCCTCAAG CGCGCTCAGA TGGCATATTT
GCCTTCTTCT CACTACCTCC CGGATCCAAC GTACAAACCT TAGAGAAAGA GGTGGGCGAT
GTGATTATTG AGCGACTCAA GCCCTACTAC GATAAGGAGA AGTCTCCCTA TATCAAGGGC
TATAACTTCT CCATGTATTC GGCATTTAAC GTGCTATTTA TCTATCCTGA AGATCCCTCA
CAAGCCGATG AGATGATCAA ACTTCTAAAC GATGAGATAT TAATCGGCCT GCCCGATACC
CAAGCTTTTA CCAACCGAGG TTCGCTGCTG CAGTTTGGCT TTAACGGCGG CCGGGCTATC
AATATCGATC TGCAAGGACC CGATATGGAA GCCTTGATGA CGTCTGCCGG TAAAGGCATG
AAGCTTATCA CCGATGCGCT TCCCGGCGCC GTCGTTCGAC CACTGCCGGG ATTATCCATG
GCGCAGCCCG AGCTTCAGCT TATTCCAAAC GAGCGACGAC TCGCTCAGGC CGGAGTGGAT
CGAACCCAGA TTGCCAATGC CATTCGAGCC TATACCTCCG GCCTGTTTGT CGGAGAATAC
TTCGATGGTA ACGAACGCAT GGATATCCTG TTAAAAGGCC CCAAATGGCA AGTCCCGGAG
CAACTATCCG CAACACCTGT CTATACCCAA GCCGCAGGCA TTCAGACAAT AGGTGAACTG
GCAAAAATCA AACGTACAGT GGGTCCGACT CAGCTGCAGA GAGTTAATGG CAAACGCAGC
GTCAGCTTAT TGATATTTCC ACCAGCCGAT ATGTCACTGG ATGAAGCATT GGAGATCATC
AATGAAAAGG CGGTTCCCAG CCTAAAGGCC AGCCTGCCGA CGAACAGCTC GCTCAAGTTC
CGTGGCAGTG CCGACAAACT GGACCAAACA ATAAAAGATA TGGGGGCTAA CTTCCTTCTG
GCAGTCGTCA TTCTGTTCCT GCTGATGTCA GCCATGTTTA AATCGGCTAA AGACAGCCTG
CTGGTACTGC TCTCTATGCC ATTGGCCATC TGTGGTGGCG TACTTAGCCT TAGACTACTA
AACTTGTTTA GTTTTCAAAG CTTAGATCTA CTGACGATGA TCGGCTTCAT CATCTTGTTG
GGCTTAGTAG TCAACAACGC CATCCTGTTA GTCGATCAGA CGCGCCAGGG AACCAGGGAT
GGACTCAATA TCGACGACGC TATCTATCAA GCTGTTGCCA CGCGGGCACG CCCTGTCTAT
ATGAGTACAC TCACCTCTAT CTTTGGCATG TTGCCACTCA TGCTGGTGCC TGGCGTCGGT
AGCGAAATCT ACCGGGGACT CGCGGCAGTC ATTGTTGGCG GCATGACATT CAGCGCGCTG
TTTACCCTGA TATTAATACC GAGTCTATTG AGGTTAACCC ACCTATCTGC ACGCAACACT
CAAACCACTC ACAACCCTTT AACTCACTCT ACTGCAACCG ACTCCGGAGC CAAGTGA
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| Protein sequence | MNLTRISTHN PAGTLVTLLL IAIFGALAIA KLPIQLLPDI QRPQISVFNN WRSAAPQEME
SNIIEPQENV LRQVPGVVEM TSNISQGFGR VSLTFEVGSN MQEAMINVIN ALNQTPPRPL
DANEPFINVG GGRGTPNLAS LLIRMAPDNP DTDFAKYQKL IDDIVEPRLR QITGVGSVQL
QSRRPKELHI LFDPYRAAAL GITLEQLRNT LSRAADISGG TANVGRRQYM VRFIGQYTPE
NLGNLIVTYN DGRPVYINEL ADVAVSSAEV QGFTKRNGYP AYYMTIEGTF DANTVTVLNG
VNDAIDELNA GALKEAGLVM DLSFDASIHI KRAILLVKGN LAIGVLLALV ILFAFLRSFR
ATLMIASTIP VALLIAFFSL EAMGRTLNVI SLAGLAFAVG LVLDAAIIVQ ENIVRLLQQG
SRLRQAIEEG TGQVKGALMA STATTVAIFV PILFMPGVEG QLFSDLALTL SVAVVSSFIS
AITLIPVFSL LWLKLPGKAA PQMNRPNLWS KLTRLIRTLT GDKKRATIWC ALLIIGSGIM
TFALMPRPDF LPQARSDGIF AFFSLPPGSN VQTLEKEVGD VIIERLKPYY DKEKSPYIKG
YNFSMYSAFN VLFIYPEDPS QADEMIKLLN DEILIGLPDT QAFTNRGSLL QFGFNGGRAI
NIDLQGPDME ALMTSAGKGM KLITDALPGA VVRPLPGLSM AQPELQLIPN ERRLAQAGVD
RTQIANAIRA YTSGLFVGEY FDGNERMDIL LKGPKWQVPE QLSATPVYTQ AAGIQTIGEL
AKIKRTVGPT QLQRVNGKRS VSLLIFPPAD MSLDEALEII NEKAVPSLKA SLPTNSSLKF
RGSADKLDQT IKDMGANFLL AVVILFLLMS AMFKSAKDSL LVLLSMPLAI CGGVLSLRLL
NLFSFQSLDL LTMIGFIILL GLVVNNAILL VDQTRQGTRD GLNIDDAIYQ AVATRARPVY
MSTLTSIFGM LPLMLVPGVG SEIYRGLAAV IVGGMTFSAL FTLILIPSLL RLTHLSARNT
QTTHNPLTHS TATDSGAK
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