| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4248 |
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| Symbol | |
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| ID | 5613605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5217924 |
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| End bp | 5218922 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640935207 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475980 |
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| Protein GI | 157377380 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00164793 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000209416 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCATTG AAGATGTTGT TATTGCGCGT AGAATTGCCG CGCAAGAAGC GGGTGAGCAA
GTTGTTCCAG ACAGTTATCA AGGCGTAACG AAGCAACGGG TTAGATACGT CCTAACGGTT
ATTGACCGAG CTACTGATAA TATGGTTGAT GTTGTTTATT CACTTTTATG TGATGAACTG
AGTTGGTACA CCCGTGCCGC TAGGCAAGAA CTTCGTTTTT GCGATGGTGC TTCTGTCGCT
CATATCGGTA CGCACGTTGG TATTCTCCAA CGCGAGAGAA ACATCAAACT TGACCGCGAA
GGCCGTGATT ATTGGCTGAA ACCGTTATGG GAAGTTGGTG CTGTACTAAA AGTTTACTTG
GATTCTAGTT CTGCGTTTAG CCCTGGTCAT CCCGTTGCCA AGTCTTCTAA TTCTGCATAT
AGCTTGTCGG ATGATTTCAA GGCTATTCTC CAAGCACCAG AGGTGGAATG GAGAGCGTTA
GCCGAAACAT GGATGCAAGC TGACGTTCAA CGTGAACGAT TAGCACTCCA AGCGGCTCAA
GCTCAAGAAA CCGCCGCAAC GATAGAAACT CCGCATAGTC GCTTAATTCG TTTAAGTCGC
GATGTTTACG CACCTCGGTT CTTAGTTGGT TATGAAGTTG TTTACGTTGA TGATGGTGAC
GGTGACCGTA TTACCGACGC TGAAACTGAA ACATTAGCCG CGGCAGGACT TGAGCTGACG
ATTGATGATG CTATGCCTGA TGTTCTATTG TTAAACCGAG AAACAAATCA CTTATGGGTT
ATTGAAGCTG TTACAAGTGA TGGTGAAGTA GATATTCATA AGAAGCAAAG CTTAGAAGCG
TTTGCAGTAC GAAACGGTAA GGTGGGTGTT GGCTTTACTA CCACATACCT AACTTGGAAG
AAAACCGCAG AACGTCAATC GGCTCTGAAG AACTTAGCAA ATGATACGTA CTTGTGGATC
CAAGAGGATC CATCACGAAA TATGTGTATA AAACAATAG
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| Protein sequence | MSIEDVVIAR RIAAQEAGEQ VVPDSYQGVT KQRVRYVLTV IDRATDNMVD VVYSLLCDEL
SWYTRAARQE LRFCDGASVA HIGTHVGILQ RERNIKLDRE GRDYWLKPLW EVGAVLKVYL
DSSSAFSPGH PVAKSSNSAY SLSDDFKAIL QAPEVEWRAL AETWMQADVQ RERLALQAAQ
AQETAATIET PHSRLIRLSR DVYAPRFLVG YEVVYVDDGD GDRITDAETE TLAAAGLELT
IDDAMPDVLL LNRETNHLWV IEAVTSDGEV DIHKKQSLEA FAVRNGKVGV GFTTTYLTWK
KTAERQSALK NLANDTYLWI QEDPSRNMCI KQ
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