| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4239 |
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| Symbol | |
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| ID | 5611164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5205184 |
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| End bp | 5206191 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640935198 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475971 |
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| Protein GI | 157377371 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.477161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000051793 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGAAAAATT TGAGTACCGA TTCACTTTTA TGGCAAAAGC GTACTTCTCA TAATTTGCGA
AGAAAAGGTA AGAAATACAA CCCAAATAAA GTACCTTTCA ATCGAGTACT GAATCAGATG
ATGTTAGAAG CTCCTGATTC ACTCGATCTA TATGACCCTG AAAAAAATCA AGAAATTTTA
GATTTCATTG AAAATATTGA AAAAATAGCA CTGACTCACA AAGTAGTTCT AGATTTTTCA
ATCACACGAT TTATTTCAGC CGCTGCACTT CTATTAATTT ATGCAAAACT TGATGCTATG
AAGAGTTCAG CACTTCACAA TCTGGTCAGA ATTAAAGCTG ATTCACTTAA AGGACAAGTA
AAATCAGCAA TAACCAAGTC AGGCCTCAAA GAGCTAACGC TTAATAGAAG GCTTGAAATC
AACCCACATA GCCGTACGAT TCCAATCATA AAAGGCTCTG CACGTGGGGA GGAGTTTGAG
CAAGTAATTG ATCATATACA ATTAAACATA CTCAAAGATC TAACTCCAGA ACAAGAGAGA
GTTTTAGGCT CTGCTGTATC GGAAACCATT GGAAATGTAA AACTTCATGC TTATCCTGAT
GATTCTACAG ATCAAAAGCC TTGGTGGATA ATATGTAGTA TCATTGACGA CTCCTTATAT
CTTGCGATTT TTGACTTAGG TGTAGGCATT CCAGCAACTA TACTTTCAAA GAGCTGGGTT
CAAAGACAAA TAAGCTCTGC ACCTAACTTG CTAAAGCTAG CTGTATCGAA ATCAGATGCA
GATCTAATTG AACTTTCAAT GCGGGTAGGG AAAACGCAAA CGAAAGAAGA AAAGCATGGG
CTTGGAAGCG CGAGTATCAA AGCGCTCGTC CATGAAACTC CCAATGGTTC TTTATGGATC
TTCAGTAACA AAGGGATGTA CCATAAACAT AGAGAAGGAT TTGAAACCAG CAATTTCAAA
TCATCAATAG AAGGGACATT AGTCCAATGG AACATACAAA TACGATGA
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| Protein sequence | MKNLSTDSLL WQKRTSHNLR RKGKKYNPNK VPFNRVLNQM MLEAPDSLDL YDPEKNQEIL
DFIENIEKIA LTHKVVLDFS ITRFISAAAL LLIYAKLDAM KSSALHNLVR IKADSLKGQV
KSAITKSGLK ELTLNRRLEI NPHSRTIPII KGSARGEEFE QVIDHIQLNI LKDLTPEQER
VLGSAVSETI GNVKLHAYPD DSTDQKPWWI ICSIIDDSLY LAIFDLGVGI PATILSKSWV
QRQISSAPNL LKLAVSKSDA DLIELSMRVG KTQTKEEKHG LGSASIKALV HETPNGSLWI
FSNKGMYHKH REGFETSNFK SSIEGTLVQW NIQIR
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