Gene Ssed_4195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_4195 
Symbol 
ID5612117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp5154210 
End bp5154503 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content44% 
IMG OID640935154 
Producthypothetical protein 
Protein accessionYP_001475927 
Protein GI157377327 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.10678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTAG ATTCATTACA GCTCAATCCG GAATCTAAGA GTCTGTCTAT TCAGGCTGCT 
ATTGATTTTG AGCAGTTTGA GCAGTTTGCC GAATCATTGG CTCAGGCCAT CGACTCGCGT
GTATTAGACC GACAGTGGGG AGCCGATAGA CATCAGTGGT TACTGGAGTT TGAAGGTACG
CATATGCAGC TCAACTATGA GTTCTATGGT GATATCTGTT GGTTATCGGT TGAAAACGAT
GACGAATTTG AAGTGCTGGA ATACTTAGCT GGCCTGTTGG AGTCTCAAAT ATGA
 
Protein sequence
MKLDSLQLNP ESKSLSIQAA IDFEQFEQFA ESLAQAIDSR VLDRQWGADR HQWLLEFEGT 
HMQLNYEFYG DICWLSVEND DEFEVLEYLA GLLESQI