Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_4195 |
Symbol | |
ID | 5612117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 5154210 |
End bp | 5154503 |
Gene Length | 294 bp |
Protein Length | 97 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640935154 |
Product | hypothetical protein |
Protein accession | YP_001475927 |
Protein GI | 157377327 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.10678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTAG ATTCATTACA GCTCAATCCG GAATCTAAGA GTCTGTCTAT TCAGGCTGCT ATTGATTTTG AGCAGTTTGA GCAGTTTGCC GAATCATTGG CTCAGGCCAT CGACTCGCGT GTATTAGACC GACAGTGGGG AGCCGATAGA CATCAGTGGT TACTGGAGTT TGAAGGTACG CATATGCAGC TCAACTATGA GTTCTATGGT GATATCTGTT GGTTATCGGT TGAAAACGAT GACGAATTTG AAGTGCTGGA ATACTTAGCT GGCCTGTTGG AGTCTCAAAT ATGA
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Protein sequence | MKLDSLQLNP ESKSLSIQAA IDFEQFEQFA ESLAQAIDSR VLDRQWGADR HQWLLEFEGT HMQLNYEFYG DICWLSVEND DEFEVLEYLA GLLESQI
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