Gene Ssed_4164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_4164 
Symbol 
ID5612417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp5120708 
End bp5120968 
Gene Length261 bp 
Protein Length86 aa 
Translation table11 
GC content52% 
IMG OID640935123 
Productacetolactate synthase small subunit 
Protein accessionYP_001475896 
Protein GI157377296 
COG category[S] Function unknown 
COG ID[COG3978] Acetolactate synthase (isozyme II), small (regulatory) subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTACA CATTAACCTT AACCCTTGCT CAGCGCCCCG AGGTGTTGGA GCGGGTACTC 
AGAGTCGTGC GCCATCGTGG CTTCAAAGTC ACCGGGATGA ATATGCAGTT AGAGGACAGC
AAAACCGCCA GCCTGGATAT GTCAGTTGAG AGTGAACGTG CCGTTGAGCT GCTCACCAAC
CAGCTGGAAA AGCTTATCGA TGTTATCCAG TGCCGGGCGC TAACCCTAGA GCCGGTAAAA
GCAGAAAAAG TCATCAGTTA G
 
Protein sequence
MIYTLTLTLA QRPEVLERVL RVVRHRGFKV TGMNMQLEDS KTASLDMSVE SERAVELLTN 
QLEKLIDVIQ CRALTLEPVK AEKVIS