| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4143 |
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| Symbol | |
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| ID | 5612947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5089220 |
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| End bp | 5089825 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640935098 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_001475875 |
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| Protein GI | 157377275 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00334816 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAACCT TCATATTCAT ATTAAGTATT GCCCTGCTTG GCGGCTGCTC ATCGCATGAT
ATCGTCACCA TGGATGAACC CACCAATCAA ATCCACGATC TTAACGATCT TGATACCGAT
GGTGTTATTG TCGCCCGAGA GCGTTGTAAT GATACAGTAT TAGGTGCCAC CATAGACAAC
TACGGCTGTG GTAAAGTGAG TGCTATTAAT GAACGCTCTG AGCTTAAGAT TTTGTTTGCA
AACGACTCTT ACTACATAGA TCCTCAGTAC TATGATCAGA TAGAGGTCAT AGCAACATTT
ATGACCGATT ATCCAAATAC TGTTGTTACC ATTGAGGGAC ATTGCAGTAA AACGGGATCT
TACGATCATA ACTTAACGCT TTCACAGAAC AGGGCTAACG CGGTAACGAC GACGTTAACT
GAACAATTCG GCATTAATCC AGATAGGTTA ACCGCGATTG GTTACAGTTT TGACCGCCCG
GTTGATATGA GTGAGACGAG TATTGCCCAT ACCCGTAACA GACGCGTCAT TGCAGAAGTG
ACCGGAGAAG ATACAACGGC AGATATGAAA TGGCATATCT ATACCGTTGA TGAAGAAGTA
AAGTAA
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| Protein sequence | MKTFIFILSI ALLGGCSSHD IVTMDEPTNQ IHDLNDLDTD GVIVARERCN DTVLGATIDN
YGCGKVSAIN ERSELKILFA NDSYYIDPQY YDQIEVIATF MTDYPNTVVT IEGHCSKTGS
YDHNLTLSQN RANAVTTTLT EQFGINPDRL TAIGYSFDRP VDMSETSIAH TRNRRVIAEV
TGEDTTADMK WHIYTVDEEV K
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