| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4099 |
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| Symbol | |
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| ID | 5612169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5015224 |
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| End bp | 5015460 |
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| Gene Length | 237 bp |
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| Protein Length | 78 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640935054 |
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| Product | twin arginine-targeting protein translocase |
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| Protein accession | YP_001475831 |
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| Protein GI | 157377231 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1826] Sec-independent protein secretion pathway components |
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| TIGRFAM ID | [TIGR01411] twin arginine-targeting protein translocase, TatA/E family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.966415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTGGCA TTAGTATTTG GCAACTTCTT ATCGTTGCTT TAATCGTAGT TTTATTATTT
GGAACAAAAA AACTTCGTTC ATTAGGTGGT GACCTAGGTG GCGCAGTTAA AGGCTTCAAG
AGCGCGATGT CTTCTGAAGA AGAGAAGAAA GCCATTGAAG ACTCTGCATC TGAGAAAACA
GCTCAGACTG AAGAGAAAAA AACTGAGTCC AAGGATAAAG ATAAAGAACA GGTGTAA
|
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| Protein sequence | MGGISIWQLL IVALIVVLLF GTKKLRSLGG DLGGAVKGFK SAMSSEEEKK AIEDSASEKT
AQTEEKKTES KDKDKEQV
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