| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4095 |
|---|
| Symbol | |
|---|
| ID | 5610472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sediminis HAW-EB3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009831 |
|---|
| Strand | + |
|---|
| Start bp | 5010839 |
|---|
| End bp | 5011882 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640935050 |
|---|
| Product | arginase/agmatinase/formiminoglutamase |
|---|
| Protein accession | YP_001475827 |
|---|
| Protein GI | 157377227 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCATC TCATCCCCTT TACAGCCCAG CATTGCCATA AACTCGTTTC ACTCCGTGGC
GGCGAAACTA AGCTGGCTCA AACGGTTCAT ACTTGTTTAG CTAAAACGAG TCTTGCAGAC
ACATTAGCCA GCGCTAAGAG TAACCAAGTT CGTTTTGCAA TTATCGGCAT AGGTGAAGAT
ATTGGCCCGC GCGCTAACTT AGGTCGTGGC GGCGCAACCG ATGCATTCGA GTCGGCCATG
ACACAATTTC TCAATCTGCA GTCGAACCGA TTCTTAAGTG GCAAAGAGTG TTTAGTATTG
GGCCAGATAG AGACCAAAGA TCTGCAGCTT CCCGAAGGAG CCGGCGCAGA GGCATTGAGA
AAAAATGTAG ACCGACTCGA TGAGCGTGTT ATCTCATTAG TAAGCCAGGT GATGGCTGCG
GGCTTAGAGC CTATCGTTAT CGGCGGAGGG CACAACAACG CCTATGGCTT ATTGATGTCG
GCCAAGTTAA CCCATAAGAA AAAAGTCGCG GCTGTTAACT TAGATCCGCA CTCTGATTTT
CGCCCCAGAG AAGGACGTCA CAGTGGCAAC GGCTTCAGCT ATGCCGCGGC CAGCGGGGCG
CTTGGGTATT ACCATGTCTT AGGCCTGCAT GAGCTAAAAA ATAGTGAAGA GACGCTGGAT
CAACTGACCA CCTTCGGTGG GCACTGGCAT ACACTTCAGT CTATCTGGGT TCGACGAGAG
ATAGCGCTGG AATCAGCCTT AAAAGAAATT ATAACTAAGC TAAATGATAG CCAGATGCCC
GTCGCATTGG AGCTGGATCT CGATGCGATA ATTAACATGC CAAGCAGCGC CTCGACTGCG
GCAGGGATCC CCTTGATAGA TGCCCTGTAT TACGTCAGCT CCGTAGCCCG AAATACGCCG
TGCAGTTATT TTCATTTAGC CGAAGCCGCA CCAGTCTGTC ATGTTGCAGG CATAGCCGCA
GGTTACCGTG AAACGGGGCA AAGCATCAGC GAGCTGATCT ACGCCTATAT TCAGGGACGA
TTACAGTCTC AGCAAATAGG TTAG
|
|---|
| Protein sequence | MQHLIPFTAQ HCHKLVSLRG GETKLAQTVH TCLAKTSLAD TLASAKSNQV RFAIIGIGED
IGPRANLGRG GATDAFESAM TQFLNLQSNR FLSGKECLVL GQIETKDLQL PEGAGAEALR
KNVDRLDERV ISLVSQVMAA GLEPIVIGGG HNNAYGLLMS AKLTHKKKVA AVNLDPHSDF
RPREGRHSGN GFSYAAASGA LGYYHVLGLH ELKNSEETLD QLTTFGGHWH TLQSIWVRRE
IALESALKEI ITKLNDSQMP VALELDLDAI INMPSSASTA AGIPLIDALY YVSSVARNTP
CSYFHLAEAA PVCHVAGIAA GYRETGQSIS ELIYAYIQGR LQSQQIG
|
|---|
| |