Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_4062 |
Symbol | |
ID | 5610294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 4974550 |
End bp | 4974903 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640935017 |
Product | hypothetical protein |
Protein accession | YP_001475794 |
Protein GI | 157377194 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAATA ACCGAGAGAT AATCGCGCGT CTGCGCGAAC GTATTCCGAC GTTCGAATGT GTGCCAGGTT GTCACGACTG TTGCGGACCG GTAACGACTT CCTCGGAAGA AATATCGCGC CTGCCTGTGA AAACTAACGC TGAACATGAC GCCGCATTAG CTGAGTGGAA CTGCGTACAC CTAGGACCTA ATGGTTGTGA AGTGTATGAG GAACGACCGT TGATCTGCCG AGTGTTTGGC ACAACACCCA ATATGCCTTG CCCAAATAGT TGTCGACCAA AAGAGATGAT TGACTCGAAA ACAGAGAGCC AGATCCATCA CTTCATCGCG AACACACGAC AAGTATTGGT GTAA
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Protein sequence | MNNNREIIAR LRERIPTFEC VPGCHDCCGP VTTSSEEISR LPVKTNAEHD AALAEWNCVH LGPNGCEVYE ERPLICRVFG TTPNMPCPNS CRPKEMIDSK TESQIHHFIA NTRQVLV
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