Gene Ssed_4062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_4062 
Symbol 
ID5610294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp4974550 
End bp4974903 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content49% 
IMG OID640935017 
Producthypothetical protein 
Protein accessionYP_001475794 
Protein GI157377194 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAATA ACCGAGAGAT AATCGCGCGT CTGCGCGAAC GTATTCCGAC GTTCGAATGT 
GTGCCAGGTT GTCACGACTG TTGCGGACCG GTAACGACTT CCTCGGAAGA AATATCGCGC
CTGCCTGTGA AAACTAACGC TGAACATGAC GCCGCATTAG CTGAGTGGAA CTGCGTACAC
CTAGGACCTA ATGGTTGTGA AGTGTATGAG GAACGACCGT TGATCTGCCG AGTGTTTGGC
ACAACACCCA ATATGCCTTG CCCAAATAGT TGTCGACCAA AAGAGATGAT TGACTCGAAA
ACAGAGAGCC AGATCCATCA CTTCATCGCG AACACACGAC AAGTATTGGT GTAA
 
Protein sequence
MNNNREIIAR LRERIPTFEC VPGCHDCCGP VTTSSEEISR LPVKTNAEHD AALAEWNCVH 
LGPNGCEVYE ERPLICRVFG TTPNMPCPNS CRPKEMIDSK TESQIHHFIA NTRQVLV