Gene Ssed_4051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_4051 
Symbol 
ID5610099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp4962039 
End bp4962377 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content49% 
IMG OID640935006 
Producthypothetical protein 
Protein accessionYP_001475783 
Protein GI157377183 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3615] Uncharacterized protein/domain, possibly involved in tellurite resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCATC TACGTATTCC GGCCAATTGG ACCATACAGC GTTCAACGCC ATTTTTTGCC 
AAGGCCAATG TACCGGCCGC ATTGTTGTCC CATCATAATA CCGCCGAAGG GGTATTTGGT
CAGCTGTGCG TCATGGAGGG AGTGGTGACC TATTTTGGCT TTGCCGATGA GCATGCTCAG
GAGCACGAAG TTAAAGTGGT TATTCAAGCC GGGAATTTTG CTACCAGCCC GCCTCAATAC
TGGCACCGTA TCGAACTGTC CGATGATGCC CAGTTCAATA TCAACTTCTG GTCCGAAGAG
GATAAAGGCG ATAGCCCTCT ATTCAATGCC AGGAAATAA
 
Protein sequence
MSHLRIPANW TIQRSTPFFA KANVPAALLS HHNTAEGVFG QLCVMEGVVT YFGFADEHAQ 
EHEVKVVIQA GNFATSPPQY WHRIELSDDA QFNINFWSEE DKGDSPLFNA RK