| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4048 |
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| Symbol | |
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| ID | 5610096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4958725 |
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| End bp | 4960185 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640935003 |
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| Product | radical SAM family Fe-S protein |
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| Protein accession | YP_001475780 |
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| Protein GI | 157377180 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1964] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCA AAGAGCGGCC CTACCTCTAT TACGACACTT GCATATCGTT ATGCTCGACC
TGCCTGGAAC GCGTCGATGG CAAGATAGTG TTTGCCGATG GGGCCGTATG GATGCTGAAA
CGTTGTCCCG AACATGGTTT CGAGCAGGTA ATGCTCGCCG ACGACATCGA ATACTATCGT
CGTAGCCGGG AGATCTTCTT AAAAACTCCC GAACAGTGTC GCAGCTATAA CACTAAGACC
CAATGGGGCT GCCCTTATGA CTGTGGGATC TGTCCCGATC ACGAGCAACA TGGCTGCACC
GTGCTCGTCG AGGTCACCGA TCACTGTAAT CTGCGCTGTC CAACCTGTTA TGCCAACAGC
TCTCCCGAGC GACAGACGCA TAGAGGTATG GAGCAGGTAA AGGCCATGCT GGACCTCGCC
GTTAAAAATG AAGGTGAGCC CAATATCGTT CAGATCTCCG GTGGCGAACC CACCCTTCAC
CCCGACTTCT TCACCATTCT CGATGAGGCC AAGGAACGGC CGATTAAGCA TCTGTTAGTA
AATACTAATG GCCTGAAACT GGCTCAAAGC GAAGCGTTCG TTAAACGACT CGCCAGTTAC
GCCCCAGGCA TAGAGGTCTA CCTGCAGTTC GACTCTCTGG AGAATGATGC GCTGGAGATC
ATGCGAGCCT CACCGCTACA GCGCATCCAC CAAAAGGCAC TCGAACACCT TAACAGATAC
AATATCGCGA CGACCTTAGT GGTCACCGTC AGGCGTGGCG TCAACGACCA TCAACTCGGC
GACATTATCG AGTTTGCCAA GCTTCAGGAT TGCGTTCGAG GCATCACCTT TCAACCTGTA
CAGGTAGCGG GCAGACTGGA GAGATATGAG CAAGGTTATC AAGCCGATAG AGACAGGCTA
ACCCTCACCG AAGTGCGCCG TAACATACTG CAACAGAACT CGACCTTCTC ACCGGAGGAT
ATCATCCCAG TGCCCTGTCA CGCCGACAGT ATAGCCATGG CCTACGCACT TAAACTCGAT
GGCCAATTCA CTCCCCTCAC AGGACTTATC GACCCGAAAA CATTAATCGA AGGTGGCACT
AACACCATAA GTTACGAGCG CGACAGCCTG ATAAAAAACA AGATATTCGA ACTCTTCTCC
ACTCACCACT CTCCCGAGAG CCAGCCTCAA GCCCTTGCAG GCCTACTGAC CTCTGGCAGC
AAACAGAGCG ACTGGAGCTC TTTGGGTTAT GAGAATGTGT TTCGAATCGT GATCATGGAG
TTTATCGATG CCTACTCTTT CGATCTTAGA AGCATTCGCA AAAGCTGCGT TCATATCGTC
CATCCCGATG CCAAACGCGT CATCCCCTTC GATACCTTCA ATATGCTCTA TCGCGATGAT
CTGGAAGAGA GAGTCTTAAA CCCTATCCGG GCTAAGCGCC CTAAGATGAA AGGTAGCATC
TCTCAGTATT TTGAGCCTTA A
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| Protein sequence | MKTKERPYLY YDTCISLCST CLERVDGKIV FADGAVWMLK RCPEHGFEQV MLADDIEYYR
RSREIFLKTP EQCRSYNTKT QWGCPYDCGI CPDHEQHGCT VLVEVTDHCN LRCPTCYANS
SPERQTHRGM EQVKAMLDLA VKNEGEPNIV QISGGEPTLH PDFFTILDEA KERPIKHLLV
NTNGLKLAQS EAFVKRLASY APGIEVYLQF DSLENDALEI MRASPLQRIH QKALEHLNRY
NIATTLVVTV RRGVNDHQLG DIIEFAKLQD CVRGITFQPV QVAGRLERYE QGYQADRDRL
TLTEVRRNIL QQNSTFSPED IIPVPCHADS IAMAYALKLD GQFTPLTGLI DPKTLIEGGT
NTISYERDSL IKNKIFELFS THHSPESQPQ ALAGLLTSGS KQSDWSSLGY ENVFRIVIME
FIDAYSFDLR SIRKSCVHIV HPDAKRVIPF DTFNMLYRDD LEERVLNPIR AKRPKMKGSI
SQYFEP
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