| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3997 |
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| Symbol | |
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| ID | 5610209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4894330 |
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| End bp | 4895082 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934951 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475729 |
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| Protein GI | 157377129 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.435374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTAAGT ATCGACAGCA GGTGTTGAAA GCGGCGCGAG AGTTGATCAT CGAAAAGGGG
CTATTCGAGT TTTCAATGCG TGATCTAAGC AAGGTCACCG GACTGTCGGT GGGCAGCTTG
TACCGGGAAG TCCGCAATAA GGACGATCTG TTGCTGCTGG GAGCCGCCGA AAACATTCGA
AGGCACGGAT TGGGTTTGAA CCAGGTAAAG ACGTTGGGGC TGAATAGCGC CGAGCAGATA
TTGTTTCAGA TTGGCTTTGC CCCCTACTGT ATAGACTTTG TTGACATGGA CAGCGACAAC
ATGGGCACCA ACTTCCTGCT TAACAACTGT GACTTGGTTA GTAGAGCTAC TCCCAAGACA
GTGGCGGAGC TCCAAGCCTA TTTCCTGCAG TATCGCCAGC AGGTGGTTGA TTTGGTTGAC
GGCCTGATCG ATGAGCAGGC ATTTTCCAAT GGCAAAGCCC AGGTAATGGA GGTGATCGCC
GATCTGTCGA TTCTCTGTCG CGGTACTCGG GTGTTACGCG TGATGCGCAC CAATATTATG
TTTCGTCCCA ATTTAGTGCC GACAGAGAAG CTTTGTCAAC TCGGGGAGTT GATTCTTCGT
CAGCTTGACT GGAACATTGA CGGCCCGCTG TTAGATCCGA AAAAAATGGA TCTGGCATGG
AAAACAGCTA TGGATCAGAG CCAAATGCTC TCGATGTCGT TGAAAAAAAA GGCTTCATAT
CGAATATCCG GGAAATGTAG CTCGGATTTT TAA
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| Protein sequence | MGKYRQQVLK AARELIIEKG LFEFSMRDLS KVTGLSVGSL YREVRNKDDL LLLGAAENIR
RHGLGLNQVK TLGLNSAEQI LFQIGFAPYC IDFVDMDSDN MGTNFLLNNC DLVSRATPKT
VAELQAYFLQ YRQQVVDLVD GLIDEQAFSN GKAQVMEVIA DLSILCRGTR VLRVMRTNIM
FRPNLVPTEK LCQLGELILR QLDWNIDGPL LDPKKMDLAW KTAMDQSQML SMSLKKKASY
RISGKCSSDF
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