| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3923 |
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| Symbol | |
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| ID | 5612645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4792386 |
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| End bp | 4793759 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934877 |
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| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
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| Protein accession | YP_001475655 |
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| Protein GI | 157377055 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain |
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| TIGRFAM ID | [TIGR00273] iron-sulfur cluster-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAATA AGAATTCAGC GGTACATGCC AAGAAGGCCG AGATATTTTG TCGGGATGAA
GCGAGAGTCG ACTGGCACTC GAAAGCCCTG TGGACGGTTC GGGAAAAGCG TGACCGTGCA
GCCGGTAGCC TGCCCGAATG GGAACAGTTG CGTCAGATAG GTTCAGAGAT GAAGCTACAC
ACTCTGACGA ATCTTGGTTT GTACCTGGAA GAGTTTGAGA AAAACTGTCT GGAAAATGGA
ATTCAGGTTC ACTGGGCTAA AGACGGGGCC GAACATAACC GTATCGTGCA TAAAATTTTA
GCCGATAAGA AAGTGAAAAA ATTGGTTAAG TCTAAGTCGA TGTTAACCGA AGAGTGTCAC
TTAAACCCTT ACCTTGAAGG ACATGGCATT GAGGTGATCG ACACCGATTT AGGTGAGCGA
ATTATTCAGC TTGCGGGTCA GCCGCCTTCG CACATCGTTC TCCCCGCTAT CCATATGAAG
AGGGGGGAAG TGGGCGATCT CTTCCATGAT AAAATTGGCA CAGAGGCTGG CGCTTCCGAT
CCATTCTACC TGACCCGCGC CGCCAGAGCC CATCTCAGAG AGCAGTTTCT GTCGGCTGAT
GCCGCTATGA CCGGTGTTAA TATGGCCGTT GCCGATAAAG GCGCCGTGGT CGTGTGTACC
AATGAAGGTA ACGCGGATAT GGGAGCCAAC TTGCCTAAGT TGCAGTTGCA CTCCATGGGT
ATCGATAAGA TTGTTCCCGA TCTTGAAAGT GCGTCGGCTC TGCTTAGAAC CTTGGCACGT
AATGCGACGG GCCAGCCGGT CACCACCTAT AGCTCATTTT ATCGTGGTCC TCAGGAGGGT
GGCGAGATGC ATGTCATTAT CGTCGATAAT GGCCGCACCG ATATGCTTAA AGATAAGATA
TTGGCAGAAT CTCTCAAATG TATCCGTTGT GGTGGCTGTT TAAATACCTG CCCGGTTTAC
CGCCGTTCCG GTGGTCATAG TTATAACTAC ACAATTCCCG GTCCTATCGG AATTGCTGTC
GGGGCACAAA ATGATGATAC CAACTCTATT CCATGGGCTT GTACCTTGTG TGGTAGCTGC
TCCTATGTTT GCCCGACTAA GGTGCCGTTA GATAAGATCA TTCACCATCA TCGTCGCTTG
AAAGCCGAGG CCGGTAAACT CCCCTATGGT AAGAGTAGTT ATATGCCTCT GGTGGGGAAT
TTTATGGCGA GCGAAACCAT GCTTAACTGC TCGATGAGTG TTGCTCGCAC CGCACTAAAA
GTCCTTCCCG GTAGCCTCCT CAAGCCTTTC TCTGGCGCCT GGGGTAAATA TCGTGAACTT
CCTACCGCTC CAAACTCAAG TTTCGAAGCT TGGTTTAAGA AAAACAGAGG CTAA
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| Protein sequence | MSNKNSAVHA KKAEIFCRDE ARVDWHSKAL WTVREKRDRA AGSLPEWEQL RQIGSEMKLH
TLTNLGLYLE EFEKNCLENG IQVHWAKDGA EHNRIVHKIL ADKKVKKLVK SKSMLTEECH
LNPYLEGHGI EVIDTDLGER IIQLAGQPPS HIVLPAIHMK RGEVGDLFHD KIGTEAGASD
PFYLTRAARA HLREQFLSAD AAMTGVNMAV ADKGAVVVCT NEGNADMGAN LPKLQLHSMG
IDKIVPDLES ASALLRTLAR NATGQPVTTY SSFYRGPQEG GEMHVIIVDN GRTDMLKDKI
LAESLKCIRC GGCLNTCPVY RRSGGHSYNY TIPGPIGIAV GAQNDDTNSI PWACTLCGSC
SYVCPTKVPL DKIIHHHRRL KAEAGKLPYG KSSYMPLVGN FMASETMLNC SMSVARTALK
VLPGSLLKPF SGAWGKYREL PTAPNSSFEA WFKKNRG
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