| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3904 |
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| Symbol | panC |
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| ID | 5611346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4773543 |
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| End bp | 4774388 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640934858 |
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| Product | pantoate--beta-alanine ligase |
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| Protein accession | YP_001475636 |
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| Protein GI | 157377036 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0414] Panthothenate synthetase |
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| TIGRFAM ID | [TIGR00018] pantoate--beta-alanine ligase
[TIGR00125] cytidyltransferase-related domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCACCA CTCAAGAAAT CAGTCAGATC CGTCAGCAAG TTCGTGCATG GCATGCAAAA
GGCGAAACCG TCGCATTTGT TCCCACTATG GGCAATCTGC ATCTGGGCCA CATTACACTC
ATTAAAGAAG CGGTTAAACG TGCCGATCAC GTCGTCGCTT CAATCTTCGT CAATCCGATG
CAGTTTGGCC AGAACGAAGA TCTCGATGCC TATCCGAGAA CATTGGCAGC CGATCAGCAA
GCCTTAAGCG ATGCAGGGGC CGAGCTACTC TTCACCCCGA CACCGGAGAT TATCTATCCT
AAAGGGATGG AGCAGCAGAG CTTTGTCGAG GTGCCCAATA TCAGCGAGCA GCTATGTGGT
GCCAGTCGTC CGGGACATTT TCGTGGCGTC GCCACTGTGG TCTGTAAGCT GTTTAACATC
GTCCAGCCCG ATATTGCCCT CTTCGGTCGT AAAGATTTCC AGCAACTGCT GGTGATCGAA
ACCATGGTGG CAGATCTCTC TATGCCTATT GAGATAATTG GCGTCGACAC CATACGTGAA
GCCTCGGGCT TAGCCATGAG CTCACGTAAT GGCTACCTCA GCCAGGACCA AAAAGACAGG
GCGGCGACGC TTAAGCGAAC CATGGACACC ATGTCTGCAG CAATACAGCA AGGTGAATCG
ATTCAGGATG TGATTCAGGC AGGACATAGT CAATTGAGCG AGGCAGGATT CAGACCTGAT
TACCTCGAGG TACGCAGTAC ATCTGACCTG TCACCGGCAT CCAGCGAAGA TTCTTCACTA
GTCATACTCG CAGCGGCCTA CATGGGCGAT ACTCGCCTAA TAGATAACCT CTGCTTCACT
CGCTAA
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| Protein sequence | MITTQEISQI RQQVRAWHAK GETVAFVPTM GNLHLGHITL IKEAVKRADH VVASIFVNPM
QFGQNEDLDA YPRTLAADQQ ALSDAGAELL FTPTPEIIYP KGMEQQSFVE VPNISEQLCG
ASRPGHFRGV ATVVCKLFNI VQPDIALFGR KDFQQLLVIE TMVADLSMPI EIIGVDTIRE
ASGLAMSSRN GYLSQDQKDR AATLKRTMDT MSAAIQQGES IQDVIQAGHS QLSEAGFRPD
YLEVRSTSDL SPASSEDSSL VILAAAYMGD TRLIDNLCFT R
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