| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3791 |
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| Symbol | |
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| ID | 5612219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4619749 |
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| End bp | 4621368 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640934745 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475523 |
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| Protein GI | 157376923 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3488] Predicted thiol oxidoreductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATGA CACACAGATA CCCGGGTTTA GCATTTGCGC TATGTATAGG GTTGAGCGCC
TGTGGTGGTT CAGGAGATGA TACTCCTGAG CCTAAGCCGG ATGAAAAAAT CTACCCGGCA
TATACCGATA TCAGTGCCAG TGGCGGTGAG ACTACCACAT TCGATGCCTC AGAGTCGGGC
CACGGTTTCT CGACGCCGGC CCCTAACCTG TCTGATGCCA ACCTGGAGCT TCATTTAGAG
GGAGATCTCG GCTTTGAAAC GGCATTTACT ACAGCGCCGA ACAGTGAACA CCCGGATCTC
GATGGTTTAG GCCCCGTATT TAATAATGCC GACTGTAATT CATGTCACCA GCGTGACGGG
AGAAACTCGA CTCCTATGGT TCAGGTCGGC AAAGACCGCA TTAAGCTGGG CTCCGAGGCC
GGGTTATTTC TGCGGATCAG TAAAGCGCCC GCCGAACCAT GTACCTTAGG TACCGAGGCA
AATAACTATT GTGCCCCCAT CGGGGTGCCA AATTTTGGCG GTCAACTGTT TCATCGTGGT
GTATTGAAGG CCAGACCCGA TTGGGAAGAC AATCTATTTG GTGGTCAGGC AGATGTGTAC
CTCTCCTATG AGACTAAGCA AGTTACCTAT CCCGATGGAA CGAGTATCAC ATTGAAAAAG
CCGCTTTTTG ATGTTGAAAA CCCATATGAT GCACCGGGTG AGACTTTAAG CAGTGCCAAC
GTAACATCTG AACTATTACA AGATGACGTC TTAATGGGAT GGCGAAATGG AATGCCGGTG
TTCGGACTCG GCTTACTCGA AGCGATCCCC GAGGCCGACA TCTTGGCTCT GGTAGATATC
GATGATGTCG ATGGAGATAA GATCTCCGGT CGGGCTAACT TTGTATTCGA TGCGGTAAAG
GCTCAGGCCG GCGATCCCAA CCCGGTCTCT TTAGGCCGTT TTGGCTGGAA AGCCAACACG
CCTAGTGTAC GAGTGCAATC TTTAGGTGCA CTGCGTGGTG ATATCGGAAT TACTAACCCA
CTGTTTCCCG ATGAGAGCGT AGTCGGTACG GCGCTGCACG ACAGTTACCT GACCCGAACC
GGTTTCACGG ATACGGGGGA AGATGAAAAT GGGGCACCAG AGGCAAGCGC AGAGTTTAGT
GATTCTGTGG TCTTCTATGC CGAAACCCTT GCGGTACCTG CAAGGCGCAA TATTGAAAGC
CAGGATGTGC GTGAGGGGGC GCGCTTGTTC GAGCAGCTCA ATTGTACCGG TTGTCACAAG
GCGAGATTCG TGACTAAATC TGCGGGTAAT ATTGGTGGTT TACCTATGGC TGAGGCGCTC
AAGGGGCAGA CTATCTATCC ATTTACAGAC ATGCTGCTCC ATGACATGGG TGATGATTTA
GCAGATGGGC GTCCGGATTT TCTGGCCGAT GGCAATGAGT GGCGTACACG CTCCCTTTGG
GGAATCGGCC TGACACAAAC CGTGAACCCT CAGGCGGGCT TCCTCCATGA TGGTCGTGCA
GCGACTCTGG AAGAGGCGAT CTTATGGCAT GGCGGTGAAA GCGAGCAGAG TCGTGATGAC
TTTATGGCGC TCAACCGGTC TGAGCGGGAG CAAGTGGTTG ATTTCCTTAT GTCGCTTTAA
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| Protein sequence | MMMTHRYPGL AFALCIGLSA CGGSGDDTPE PKPDEKIYPA YTDISASGGE TTTFDASESG
HGFSTPAPNL SDANLELHLE GDLGFETAFT TAPNSEHPDL DGLGPVFNNA DCNSCHQRDG
RNSTPMVQVG KDRIKLGSEA GLFLRISKAP AEPCTLGTEA NNYCAPIGVP NFGGQLFHRG
VLKARPDWED NLFGGQADVY LSYETKQVTY PDGTSITLKK PLFDVENPYD APGETLSSAN
VTSELLQDDV LMGWRNGMPV FGLGLLEAIP EADILALVDI DDVDGDKISG RANFVFDAVK
AQAGDPNPVS LGRFGWKANT PSVRVQSLGA LRGDIGITNP LFPDESVVGT ALHDSYLTRT
GFTDTGEDEN GAPEASAEFS DSVVFYAETL AVPARRNIES QDVREGARLF EQLNCTGCHK
ARFVTKSAGN IGGLPMAEAL KGQTIYPFTD MLLHDMGDDL ADGRPDFLAD GNEWRTRSLW
GIGLTQTVNP QAGFLHDGRA ATLEEAILWH GGESEQSRDD FMALNRSERE QVVDFLMSL
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