| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3781 |
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| Symbol | |
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| ID | 5609960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4607974 |
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| End bp | 4609119 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934735 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475513 |
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| Protein GI | 157376913 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTATTAG TGGCATTTCA TTGTAATCTA GCCCTATTAA TCAGTTGTGA TCGAATAGAA
GGTTTCAGCT TGCAAAGTCA ATCGACCAAT GGCTCAGATG CGTCAGAGCT TATCAAGATA
GCCACCTTCA ACCTGTTCAA CTTCATTGAG CCGCCAGGTG CATTTTATGA ATTTGAAAAT
ATTTACACTC AGGAGCAGTG GCAGAAGAAA CTGGATTGGA TCGCGACTTA CATTAATGAG
CACCAGCCCG ACGTCATTGG ATTTCAGGAG GTCTTTACCC CCGACGCGCT GGCGCAATTA
ACCCAGCGTT GCGGTCTGGA GTACTTTGCC GTGTTAGATA CCCCCGAGGT TGTCGATGAC
TTTATCTATA GTAAGCCCGT CGTCGCTTTA GCATCGCGTT ATCCCATCAC TGAGGTTCAC
AATGTCACCG TGGGTGATGG CTGGGCATCC ATGATGGGGC TGCAGGATGA CTTTGGTTTC
AGCCGAAAGC CGCTGAGGGT GACTATCTCT CTGCCCAAAT TAGGGTCCTG TGACTGTTAC
GTCGTCCACT TTAAATCCAA GCGTCCGCTT TTCGATGCTC AAGAGCTTAA CGGGCTGACG
ACTCCCTCCG CGGATTCTTC TGGCGGAAAT GTTGGCCAGC TCCTCTCCAT AGAGGCTCTG
GCTCAGTGGG GTTCGAGCAT ACAAAGAGGC TGTGAGGCTG CGCTGCTGCG TTATTCTATG
GTCGAGCGCC GCACTCAAAC GGGCAACCCC ATGGTATTAA TGGGAGACTT TAATGATATT
TTGAGTGACG GAGTACTCGC CTCTTTGACC TCTGTCGATA CCCGGATTAA ACCCGACCCT
CTGCTGGGGG AGGTTGAACA CCAACTGCGA GACCATAGGC TTAAAGATGC CTATGAGCTT
TATCAATCGA GTCAGTACAG CCTCTCCTGT CAACAACGGC CTGCAACACA TTATTACTTT
GCTAAAGGCT CTGTGCTGGA TTACATCTTG CTTTCGAGTG AGTTTGATAT AAAAAATAGT
CGCAGTTTGG CAGAGGTCGG AAGGTATGAA ACCTATGACA GGCACCTCAT CAACCCTAGG
TTTGAGCGGG ATAGCCAGAG TACTGACCAC GCTCCGGTGA TGATAACCAT CTCAATTCGA
CACTAA
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| Protein sequence | MLLVAFHCNL ALLISCDRIE GFSLQSQSTN GSDASELIKI ATFNLFNFIE PPGAFYEFEN
IYTQEQWQKK LDWIATYINE HQPDVIGFQE VFTPDALAQL TQRCGLEYFA VLDTPEVVDD
FIYSKPVVAL ASRYPITEVH NVTVGDGWAS MMGLQDDFGF SRKPLRVTIS LPKLGSCDCY
VVHFKSKRPL FDAQELNGLT TPSADSSGGN VGQLLSIEAL AQWGSSIQRG CEAALLRYSM
VERRTQTGNP MVLMGDFNDI LSDGVLASLT SVDTRIKPDP LLGEVEHQLR DHRLKDAYEL
YQSSQYSLSC QQRPATHYYF AKGSVLDYIL LSSEFDIKNS RSLAEVGRYE TYDRHLINPR
FERDSQSTDH APVMITISIR H
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