| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3770 |
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| Symbol | |
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| ID | 5610120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4593262 |
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| End bp | 4594233 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640934724 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475502 |
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| Protein GI | 157376902 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGAA GACGCCCCCC TCAACAACAA AGCACACCTG AAGAGTTGGC CAGCCAACTC
AGGTTAGATG AGATCAAGCT GTTTAACTTG GTCGCTAAAC TGGGCAGTTT CAGTGCCGCA
GCCAAGCAAT CTGGCATCAG CCAGCCTACC GCCAGCCGTC GCATCCGTCG CCTGGAGGAG
AGCCTGAGTC TGCGGCTGTT CGAACGTACT ACCCACACTG TGACTCTGAC TGAACTGGGG
ACGCAGTTTT TGCAGCACAG TCTGCAACTT ATGGCCAATT TCGACAGTAC CCTGAGTTTC
GTGCGGCAGA CCAGAGAGGA GCCGGCGGGC CTGTTAACCG TAGGACTGCC ACTCTGGTTA
CTGCAAACTA TCGACAGCCG TTTTTTTGCG GAATTTTTGC AAAAATACCC GAAAATCCAG
CTCAACTTTT ATAATGTCTC CCCGGTGCGG CTTCAGGCCG AGAGCTTTGA GTGCGATGAA
ATGGATCTGA TGCTGCATTT CTTTCTTCCC GCCGATCGTA AGATGACAGC CCGGCCGCTG
CAAGCGTACA AGCTTGATTT TTTTGCCAAT CCAAATTATC TGGCAAGGGC GCCGACACTG
GAGCATCCTC GTCAATTCAG CCAACATGAC TGCCTGTATG TCCGAAACCC ATTCTTACAA
GACAAGGGCT GGCTCTGGAC CGAAAACGGC CAGACCAACT CGGTTATCAT CAATGCGCTG
ACGACATTTG AGACATTCAC CCCGGCGTTA GACTGGGCTC TGCAGGGAAT TGGGGTGATC
TGGTGCCCCA CACCTCTCAT CGATAAAGCC GATCCGCAGC GGCAGATGAT AAAGCTGTTT
GACGGTGCCT ATGCGACAAG CTTAATCCTT AACGCTATCT ACCCGTCCAG GCGACTCCTC
TCCCCCAAAG TTAAAGTATT TATGGAGGAA CTGACCTGCT TTCTGCGCAG TGGTCATGCA
GCAAGCGTAT AA
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| Protein sequence | MQRRRPPQQQ STPEELASQL RLDEIKLFNL VAKLGSFSAA AKQSGISQPT ASRRIRRLEE
SLSLRLFERT THTVTLTELG TQFLQHSLQL MANFDSTLSF VRQTREEPAG LLTVGLPLWL
LQTIDSRFFA EFLQKYPKIQ LNFYNVSPVR LQAESFECDE MDLMLHFFLP ADRKMTARPL
QAYKLDFFAN PNYLARAPTL EHPRQFSQHD CLYVRNPFLQ DKGWLWTENG QTNSVIINAL
TTFETFTPAL DWALQGIGVI WCPTPLIDKA DPQRQMIKLF DGAYATSLIL NAIYPSRRLL
SPKVKVFMEE LTCFLRSGHA ASV
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