| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3711 |
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| Symbol | |
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| ID | 5612056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4516053 |
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| End bp | 4517534 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934664 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475443 |
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| Protein GI | 157376843 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1509] Lysine 2,3-aminomutase |
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| TIGRFAM ID | [TIGR00238] KamA family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATCA TCAACCGGGA GAGGTTGTTG CCGGCGGGGT TGCTTAGTCG GTTGCATGCT
TCCTATCCGC AGCACTCAGG TTTTCTCGAA AGCCGTGAGT TTCTCTTTAA TGAGAAAGAT
CACTACACGG GCTTGTCCGG GTTTCGTGAA GTCTGCGCGA TACTGAATAA GAATGGCATA
GATATCGGTG CCATCGATGA GCGGGAACTA TTTGTCGAGG TGTATCGTTT CCTGGCGACG
CGCCACACAC TGAATAGCAT TAACTGGGAT GATTATCCAA CCGATTCTGT GTTCCAACTG
GTGTTTCCAC AACCCGGGAT GATCGATGAA CAGACGACGC AGCAATATGT CGGAAGCCCG
GATGCTAAGG CCCGCACTCA GGTCGCTATC GATTACATGG AGAAGACGAA TCCACACGAT
GGCAATCAGC AGTTAAATAA GCCCTGGTTT GTGAACGATG AAGGCGTGCT GGAGTTTCTC
GATGGTAGCC AGCACAAGTA TCCTCAATGC CAGTTGGTGT TTGATAAGAC CACCCAAAAC
TGTTTCTCCT TCTGCACTTA CTGTTTCCGT CATGCACAGG TCCGTGGTGA TGAAGATATG
TTTATCCAGA AAGATATTGC CCAACTGCAT GAATACCTGA GACGACATCC TGAAGTGACC
GATATTCTGA TCACCGGCGG TGATGGCGGT TATATGCCTG TGAGCCGTTT ACGCCAGTAT
GTGATGCCCC TTATCGAAGA TCCCTCTCTG CTGCATGTTA AAAATGTCCG CCTGGCAACC
CGCGCGCTGA CCTTCCAACC CGAGATGGTG CTAACTGAAA AGTATGAACC TATGTTGGAG
CTGTTCGACA CTATGCGTGA TAACGGCGTG CAACTGGCGT GGATGGCTCA CTTCTCTACG
CCTCGCGAAC TGCTTAATCC AAGCACCATA GCGGCTATTC GTCGTCTGCA AAACCACGGA
GTGAATATTC GTAGTCAGAG TCCGATGATG AACCATATCA GCCTGTTCAA AGATGAAGCC
GGTAATGTCG ATGTCGAGCG CTCCTCTCAA AACTGGATCG ATCTGGCGAC CATACTGGGC
ATGATGTGTG TGGGCTTCCA CTCCATGTAT TGCGCCCGCC CAACCGGCGA GCATCATTAT
TACACCGCGC CGTTGGCCGA TATGGGCAAA ATTTTCAATC GCATCTACCG CTCACTCGCC
TCTATCAATC GTCCTTCACG CCATATCTCT ATGACTATAT CGGCAGGTAA ATTGGCCATC
CTGGGTACCT CGGTGGTTAA TGGCGAGAAG TGTTTCGCCT TGCAGTTTAC CGAGGCCAGA
AACATGGAGT GGATGGATAG AGTGATCTTG GCGAAATATG ATGAGAAGGA GAATAAGATC
GACTGCCTTA CGCCACTGGA TACCGATAAG TTCTTCTTCG AAGATGAACT CAAACAGATT
GAGGCAGATC TGGCAGATGC GCTGCAGCAG CGTTTAGGTT AA
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| Protein sequence | MNIINRERLL PAGLLSRLHA SYPQHSGFLE SREFLFNEKD HYTGLSGFRE VCAILNKNGI
DIGAIDEREL FVEVYRFLAT RHTLNSINWD DYPTDSVFQL VFPQPGMIDE QTTQQYVGSP
DAKARTQVAI DYMEKTNPHD GNQQLNKPWF VNDEGVLEFL DGSQHKYPQC QLVFDKTTQN
CFSFCTYCFR HAQVRGDEDM FIQKDIAQLH EYLRRHPEVT DILITGGDGG YMPVSRLRQY
VMPLIEDPSL LHVKNVRLAT RALTFQPEMV LTEKYEPMLE LFDTMRDNGV QLAWMAHFST
PRELLNPSTI AAIRRLQNHG VNIRSQSPMM NHISLFKDEA GNVDVERSSQ NWIDLATILG
MMCVGFHSMY CARPTGEHHY YTAPLADMGK IFNRIYRSLA SINRPSRHIS MTISAGKLAI
LGTSVVNGEK CFALQFTEAR NMEWMDRVIL AKYDEKENKI DCLTPLDTDK FFFEDELKQI
EADLADALQQ RLG
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