| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3700 |
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| Symbol | |
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| ID | 5613587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4504052 |
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| End bp | 4504927 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640934653 |
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| Product | putative cation transporter component |
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| Protein accession | YP_001475432 |
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| Protein GI | 157376832 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.772401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGGCAA ACGTTTCTGG CATACAGGAC AAACTTAAGC TGATTGACAA CAGCAAGGCC
TTTCAGGGCT TCGTGATTTT CGTGATCATA GTGTCAGCCT TGTCGATCGG TGCACACACC
TATCACCTGC CATCTTGGAT GGAGAAGAGT CTGGTGGTGC TGGATGTGGG CATTACTGTG
TTTTTTGCCA TCGAAATTGT GATTCGATTC TTAGCGAGCG ATGGCCCAAA GAAGTTTTTC
ACTAATGGCT GGAATATTTT CGATACTCTG ATTGTGATTG GCAGTTTAAT CCCCGCTGGT
GGAGCTGGAA TTCTCATCGC CCGTTTGTTG CGGATCTTCA GGGTGCTACG ACTCGTCTCT
ATGATCCCAG AGCTGAGAAT GTTGGTGAAT GCGCTTCTGA AGGCCATTCC CCGCATGGGT
TATATCGCCT TACTGATGTT TGTGATCTTC TATATCTATG GCGCCATCGG CAGCATGTTA
TTTGCCCATA TCAATGACTT TCTTTGGGGC GACGTCTCGG TCGCTATGCT AACCCTGTTT
AGGGTGTCGA CGTTCGAATC ATGGACCTCT GTAATGTATG AAACCATGGC GGTCTATCCG
CTGAGTTGGA TCTATTATCT TAGTTTTATC TTCCTGACAG CCTTTGTATT TCTGAACATG
ATGGTGGGGG CGGTACTCGA TGTGATGACT CAGGAAACAC AAGCGATGCG CTTGGAGGAA
GAGGCCGAAG AGGAAGCCAC CAACCTTAAT AGCCAGAAGC TAGATATTAA AGCTAAAACT
GAACAGCCTG CCAGCGCCGC CGACGTGGCG GAACTTAAAC AGCAGATAGC CGAACTCAAA
GGCATGCTGG TTCAAAGTGT GCAGAGGGCG GGATAA
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| Protein sequence | MLANVSGIQD KLKLIDNSKA FQGFVIFVII VSALSIGAHT YHLPSWMEKS LVVLDVGITV
FFAIEIVIRF LASDGPKKFF TNGWNIFDTL IVIGSLIPAG GAGILIARLL RIFRVLRLVS
MIPELRMLVN ALLKAIPRMG YIALLMFVIF YIYGAIGSML FAHINDFLWG DVSVAMLTLF
RVSTFESWTS VMYETMAVYP LSWIYYLSFI FLTAFVFLNM MVGAVLDVMT QETQAMRLEE
EAEEEATNLN SQKLDIKAKT EQPASAADVA ELKQQIAELK GMLVQSVQRA G
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