| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3669 |
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| Symbol | |
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| ID | 5613793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4470209 |
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| End bp | 4471909 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640934622 |
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| Product | putative monovalent cation/H+ antiporter subunit D |
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| Protein accession | YP_001475401 |
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| Protein GI | 157376801 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGATGC TTGAGCTACC GCCCTTTACC CTGTTCTTTA TAGGCGGGCT TATTGCTGCA
ATGACCCGGG GCAAATTACG CGGTGCGATA ATGGTGGCCA TTCCTGTCAT TAGCGCAATG
CACCTGTGGA CTGTGCCTGA AGGCATTCAT CTGCAGCTGA CATTTTTAGA TTATGAGCTG
GTGCCATATC GCGCTGACAA ACTGAGCCTG ATGTTTGGCT ACGTATTTCA TATCGCCGCA
TTCATCTCCA TTATCTACTC GCTTCATGTC AAAGATACCG TACAACAGGT AGCAGCCATG
CTCTATGCAG GTAGTGCGCT GGGCGCGGTA TTTGCCGGCG ATCTACTGAC CCTATTTGTA
TTCTGGGAGC TACTGGCATT TACCTCGGTA TTTCTGATCT GGGCGCGCAG AACGTCCCGC
GCTTATCATG CCGGGATGCG ATACCTGATC ATTCAAGTGC TATCAGGCGT CATATTGCTG
GTAGGCGCAC TATTTTATGC CGCCGAAATG GGCTCACTAG CCTTTGGCTA CATCGGCCTG
GAGAGTATCG CTGGCTGGCT GATATTAATC GCCTTTGGCA TTAAATGTGC CTTTCCCTTT
GCCCATAACT GGCTCACAGA TGCCTACCCA GAGGCGACGC CTACGGGTAC TGTGCTCCTC
AGTGCATTTA CCACTAAGGT GGCCGTTTAT GCCCTAGCCC GGGCCTACCC TGGCACCGAG
CTGCTGGTAT ACATTGGCGC AGCCATGACC TGCTTCCCAA TCTTCTTTGC TGTGATTGAA
AATGATCTTC GCCGCGTGTT GGCCTATAGC TTGATAAACC AAGTTGGCTT TATGGTGGTG
GGTATCGGGA TCGGTACCGC ACTGGCAATC AACGGCGCCA TTGCACATGC TTTTAACGAC
GTGATCTTCA AAGGCCTGCT GTTTATGAGC ATGGGCGCAG TGCTGCATAT GACGGGCAGA
ATAAACGGCT CAGATCTGGG CGGCCTGTAT AAGACCATGC CCAAGACCAC GATACTCTGT
ATCGTAGGTG CGGCTTCTAT CTCAGCCTTC CCGCTGTTCA GTGGCTTTGT CAGCAAGTCG
ATGGTGATGT CTGCGGCGCT TGAAAACGGT TATGACTGGA TCTGGTTGAT GTTGCTGTTC
GCCTCCGCTG GTGTGTTCCA TCATGCAGGG ATCAAGATCC CCTACTTTGC CTTCTTCGCC
CACGACTCGG GGCTGCGCGC CAACGATCCA CCTGGCAATA TGTTGTTCGC CATGTTTATC
GCCGCCAGCC TCTGTGTTGC CATCGGTATC TATCCTGCGG CGCTGTACTC CCTGCTGCCA
TATGATACGG GTTATAACCC TTATGATGCG ACCCACGTAT TGGCGCAAAC TCAGTTGCTG
CTGTTCTCAG CCTTGGCGTT CGTCTGGTTA AACTTGAGAA ACATGTATCC GCCAGAGCTG
CGCTCGACCA ACTTAGATGT GGATTGGATC TACAGGCGCG CCATTCCCAA TGTGCTGCAA
AAAGTGTTTG CAGTTATTTG GCAGGCAGAC GGGGCGCTGC GCCAAGCTGT TAGTGGCAGA
TTAAACCAAT GCCAGTCCTT TATTGCCAGC AAACATAAAG GCTTAGGAGG CCTGCTCTCA
GGCTCATACC CTTCTGGCAA TATGGTGTTG TGGGTAGGCG TGCTGCTGGC CTCCTACCTG
TTTATCGGGT TTGTTGGCTA A
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| Protein sequence | MWMLELPPFT LFFIGGLIAA MTRGKLRGAI MVAIPVISAM HLWTVPEGIH LQLTFLDYEL
VPYRADKLSL MFGYVFHIAA FISIIYSLHV KDTVQQVAAM LYAGSALGAV FAGDLLTLFV
FWELLAFTSV FLIWARRTSR AYHAGMRYLI IQVLSGVILL VGALFYAAEM GSLAFGYIGL
ESIAGWLILI AFGIKCAFPF AHNWLTDAYP EATPTGTVLL SAFTTKVAVY ALARAYPGTE
LLVYIGAAMT CFPIFFAVIE NDLRRVLAYS LINQVGFMVV GIGIGTALAI NGAIAHAFND
VIFKGLLFMS MGAVLHMTGR INGSDLGGLY KTMPKTTILC IVGAASISAF PLFSGFVSKS
MVMSAALENG YDWIWLMLLF ASAGVFHHAG IKIPYFAFFA HDSGLRANDP PGNMLFAMFI
AASLCVAIGI YPAALYSLLP YDTGYNPYDA THVLAQTQLL LFSALAFVWL NLRNMYPPEL
RSTNLDVDWI YRRAIPNVLQ KVFAVIWQAD GALRQAVSGR LNQCQSFIAS KHKGLGGLLS
GSYPSGNMVL WVGVLLASYL FIGFVG
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