| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3590 |
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| Symbol | |
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| ID | 5613847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4378291 |
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| End bp | 4379241 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640934543 |
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| Product | transcriptional regulator-like protein |
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| Protein accession | YP_001475322 |
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| Protein GI | 157376722 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATAG ATAAGTTGCT GAATCTCAAC TTACTAAGCA TTGAAATATT TTGCCAAGTC
TATCTGAAGC AGTCAGTGAT TGATGTGGCC GATCATTTAG CACTGTCTCA ACCTAAGGTC
AGTCGCGAGC TAAATGCACT GAGAAAGGCA TTTTCAGATC CACTTTTTAT CAGGCAGAAT
AACCGTCTCG AAGCCACAGA GCTTGCTCAC AACCTATACC CTCAGCTGCT GGAGATGCTT
AAGGTAAGTA CTCAGGCACA GAAATACTTA AACAATATTC ACCACCAGCG CGAACCGAGT
TTCACGATTG CCACAGTGCC ACAACTTGAG ATTAACTTAC CTCAAACCAT TCTTAAGGCG
GCAGAGAAGA ATAATGCCAA GATAGATGTC ACCCTCTGTC CCTGGACAAA AACCAGCATA
GAAGAGTTCC AAAATGGCGA TCTCGATGCG GCTATCAGCT TCGAGCCAGC CGATAGAAAG
GGAATATTGT CAAAGCCCAT CATTCAACAC AGAGGCGGGC ACTTAATTGC ACGTGAAGGG
CACCCGATTT GGCACAACCC GGTTATCGAT GAGATGATTA ACTATCCGAT AGTGAAGCTG
ATCACCATGC CCTTCCCCGC CAACAAATCA CCATTGGTAA ACTATGCCAA AAGGCAGGGG
AAGAAATTAG AGGTATTTGC CACCGTCTCT GATCTGGGAA GTGCCGCCAA TACCCTATTG
AATTCAAATG CCATCATCAT TGTGGGCGTC AGGGCTGCGG TTAACTTTTT GCAAAACATT
AATGGACTTC ACGCTGAGAT ACTGGATTAC CAACAAGATA AAGACATACT AAAAAACTTC
AGTTATCCAA CGACCTACTT ATGGTTAAAG CACAATCAGG AAGGTCAGGT CACCTCACCT
CAATGGCTAC AGCAAGCCCT GGAAAAATTC ATTACCGAGG CTCATAGGTA A
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| Protein sequence | MSIDKLLNLN LLSIEIFCQV YLKQSVIDVA DHLALSQPKV SRELNALRKA FSDPLFIRQN
NRLEATELAH NLYPQLLEML KVSTQAQKYL NNIHHQREPS FTIATVPQLE INLPQTILKA
AEKNNAKIDV TLCPWTKTSI EEFQNGDLDA AISFEPADRK GILSKPIIQH RGGHLIAREG
HPIWHNPVID EMINYPIVKL ITMPFPANKS PLVNYAKRQG KKLEVFATVS DLGSAANTLL
NSNAIIIVGV RAAVNFLQNI NGLHAEILDY QQDKDILKNF SYPTTYLWLK HNQEGQVTSP
QWLQQALEKF ITEAHR
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