| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3581 |
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| Symbol | |
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| ID | 5611109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4363103 |
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| End bp | 4364317 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934534 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit B |
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| Protein accession | YP_001475313 |
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| Protein GI | 157376713 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1805] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB |
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| TIGRFAM ID | [TIGR01937] NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGCA AAGATAGAAA GCCCGACGCG CAGGAAGATT ACTACGCTCC CGGGCACGCG
ATGAAGGGCT ACCTTCGTTC GCTGGTCGTT GCTCATGGTC GTAGCACTAA AGGTAAAGTG
CACGTTCGTG ACGCGATTGA TGTTAAACGT ACCATGACCT TAGTGGGTCT ATGCCTGCTA
CCAGCCATCC TGTTTGGTCT GTACAACTTA GGCTTGCAGG CTCAGCTTGC TGTTGCCGGT
GGACTGGCTA CGCCAGATGT ATGGCAACTA GTGCCGTTTA ACCTGATATT CGGTGGTTTG
ACGGAACAGA CGGGTCTGAT TGGCCTGTTT ATCTATGGCA TCAGTTTTTA TATTCCTATC
TATCTGACCG CGCTGGTTGT CAGCCTGTTC TGGGAGATGG TTTTCGCCAA GGTGAGGGGA
CAAGAGCTGC ACGAAGGCTT CTTCGTCACC GCCCTGTTGT TCACCTTAAT CTTACCTGTG
TCGACGCCGC TTTGGTTGGT AGCCATGGGT ATTACTTTCG GTGTGGTGAT TGGCAAGGAA
GTGTTTGGTG GCATGGGTTA TAACTTCCTT AACCCAGCCT TGGCTGGATT GGCATTTATC
TACTTCGCTT ATCCATCGCA GGTCTCTACG GTCGCTCAAT TGGTTGCCGT CGATGGTTTC
TCCGGGGCGA CAGCCTTAAT TCAGACTGCC GCTGGCAAGA TGAGCTTTGC CGATTATGCC
TGGTATGAAG CCTTCACCGA TCCTAACTGG TGGAACGCCT TCTTCGGCTT TACCGCGGGC
GCGATTGGTG AAACCAGTAC CTTAGCATTA TTGATTGGCG GCGGATTATT GATCCTGACT
CGCCTGGCTG ACTGGCGCAT CGTTGCCGGT GTCATGCTGG GCATGATAGC GACTGCAGTC
ATGTTTAACC TTGTCGGTTC GGCGAAGAAT GAGTTGTTTG CCATGCCATG GACCTGGCAT
CTGGTCACGG GTGGTTTTGC CATAGGTATG ATGTTTATGG CTACCGATCC AGTGACAACG
GCTTACACCA ATAAAGGTAA GTTAGCTTAT GGTCTCTTGA TTGGCTTTAT GACTGTGCTT
ATCCGTGTGG TTAACCCGAA AATGCCGGAA GGCATCATGT TGGCAATCTT GTTTGCTAAC
TTATGGGCAC CCATTTTTGA TTATCTGGTC GCGAAAGCGA ATATCAAGCG GAGACTGAAA
CGTAATGGCC TTTAA
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| Protein sequence | MSSKDRKPDA QEDYYAPGHA MKGYLRSLVV AHGRSTKGKV HVRDAIDVKR TMTLVGLCLL
PAILFGLYNL GLQAQLAVAG GLATPDVWQL VPFNLIFGGL TEQTGLIGLF IYGISFYIPI
YLTALVVSLF WEMVFAKVRG QELHEGFFVT ALLFTLILPV STPLWLVAMG ITFGVVIGKE
VFGGMGYNFL NPALAGLAFI YFAYPSQVST VAQLVAVDGF SGATALIQTA AGKMSFADYA
WYEAFTDPNW WNAFFGFTAG AIGETSTLAL LIGGGLLILT RLADWRIVAG VMLGMIATAV
MFNLVGSAKN ELFAMPWTWH LVTGGFAIGM MFMATDPVTT AYTNKGKLAY GLLIGFMTVL
IRVVNPKMPE GIMLAILFAN LWAPIFDYLV AKANIKRRLK RNGL
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