| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3580 |
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| Symbol | |
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| ID | 5611108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4362343 |
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| End bp | 4363113 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934533 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit C |
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| Protein accession | YP_001475312 |
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| Protein GI | 157376712 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2869] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC |
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| TIGRFAM ID | [TIGR01938] NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTTA AAAAAGATAC AGTTCTTGGA ACTATGATCT TCACAGTCAC ACTGTGCTTG
TTATGTTCTT TTATGATCAC AGGTACAGCG GATCTGCTTA AAGAGCGCAA GCTGGTGAAG
AAGCGTGACG AACTTAAACG TTATGTGTTG ATGGCTGCCG ATGTAGATAT GAGCGGCGAT
ACAGATTTTC GTACTATTTT TGAAAAATCT GTCACCCCTA TGCTGGTTGA GCTGGATACG
GGAGTGATCA CGACGGAAGG TGAGATCATG GACTTCGATG ACCGCATGGC GGCGATCAAT
CCTGAGACAT CGAGCAAACC GAAAAAAGAT ACCGCTAAGA TCAAGAGCCG CGCCGACCAG
GTTCGGGCAT TCAAAGTCTT TGACGATAAC GGCAAGTTGA CCAGTGTGGT TGTGCCTATC
TACGGCAAGG GACTCTGGTC CATCATCTAT GGCTTTGTGG CGGTTAAGCC CGACATGAAT
ACCATCGAAA ATGTAGTTTT CTATGAGCAC GGTGAAACCC CGGGTATTGG TGATTTCCTC
GGCGAGACTG ATTGGACTAA CAAGTTCAAG GGTAAGCTGC TCTTCGATGA AAAAGGCAAA
GTGGCACTAA GAGTGGTTAA AGGCGGCGCC AAAGAGGGTG ATATTCACGG TGTCGACGCG
GTCAGCGGTG CAACCATGAC GGGTCGCGGT GTGCAACGCT CGATTCAGTT CTGGTTCGGC
AAGGAGGGCT TCCAGACCTT CTTCAACAAG TTAAAAGCTT CGGAGGTCTA A
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| Protein sequence | MAFKKDTVLG TMIFTVTLCL LCSFMITGTA DLLKERKLVK KRDELKRYVL MAADVDMSGD
TDFRTIFEKS VTPMLVELDT GVITTEGEIM DFDDRMAAIN PETSSKPKKD TAKIKSRADQ
VRAFKVFDDN GKLTSVVVPI YGKGLWSIIY GFVAVKPDMN TIENVVFYEH GETPGIGDFL
GETDWTNKFK GKLLFDEKGK VALRVVKGGA KEGDIHGVDA VSGATMTGRG VQRSIQFWFG
KEGFQTFFNK LKASEV
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