| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3567 |
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| Symbol | |
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| ID | 5613381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4347419 |
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| End bp | 4348963 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640934520 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475299 |
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| Protein GI | 157376699 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGTC AGATAAAAGC ACGTACCCTC AAAGTCCCCA TCACCAACGT CTACGCCAAG
GGGGACTACT GCGCCCAACT ACGTCTGGGT AGTCAGGCAC AGAGGGCCAA CCTTATCCTG
GACACGGGTA GCAGCACCCT TGTTGTAAAG CAAAGTGCAG TGAAACAAAA TGTAGTGAAT
CATAGTGTCG TGAACCAAAA CGCCTACCAC CCTCAGGATG ATAACTTACT GACCGTCACC
AGCTTGGCTC AAGAGGTCAA CTACGGCATA GGTGGTTGGG ACGGCCCCGT GGTCACAACC
CGGGTCGCTC TCTGTGAAGA GAGCTGCGAA GATGAGATGG CGTTCGATAA GCGCCTGCCA
CACCTTCACT TAGCCCGCCA ACCTCTGGTG CTCGACGCCT GCCCCCTAGC TATCGTCTCC
AGTGTTAAAC AGCAACAAAC CTTTGGTGAT GCCGATGGCA TATTGGGGCT GGGCTACCAT
CACCTCAACA GGAGCTACGA TCTTAAAGCC TATCTCGAAA GCCATCAATA TTCACCGGCG
GTAACCTATC CCTGGCCCTT CGCCGATGCT ATCAGCCTGA GCGATACTAA GGGCAAGAGT
GACTGCCAGA GCACGATTAA TAATGAGAGT AAGCGTCAGA GCGATACTAA AGCTAAGAGT
AAAACTGACA ACAAGAACAA AAAGAAAACA GAACTCCCTT TCAGCAGCGA AGACCTTAAA
CAGTTTAAGC AGTTTCTCTG GCAGCAGCCG GAGCAGGATC TCATCCCCTA CTTCACCGCC
CTCGAAGAGC ATGGCCTCAC CGCGAATAAA TTTGCCTTCT ATAGCCGGCG CTCCAGCATC
CACGTCACCA ACGGCGACTT GTCACCTCAG CAGCTGGCCA ATGATCCGCT CAACCGGGGC
TGGCTTATCC TCGGCGGAGG AGAGGAGCAT ACGGAGCTCT ACCAGGGAGA CTTTCACACC
ATCAGAGTCG ACCACGACAT CTATTACAAT GTCACACTCA CCTCGATACG CGTCGGCGAC
CAGCCACCAA TCCCCGCTCC GGCGCTCGAT GAAAAGTACC GCAAAAACTA CTACAGCAAT
GCCATCGTCG ATACCGGCGC CTCGGCCATC GCCCTTACCG AGCCCCTCTA TCGAGCCCTG
CTAAAGAGCT TAGCAGCCAT ATCGCCAAAG TTTGTTCCCT TGATAGCCCC CTTTAAAGAG
ATATCCGCCC AGGAGAGAGG CATAGATGCA TCGCTCCTGG ACCTGAGCCA ATGGCCGGAT
ATCACCTTCA CCTTCCTGGG CGATATGGAT GGCGATTTGG ATGAGAATAA AGCTGCCGGC
ACACAGAACT CCGACCGACA AGCCGTGAGC ATAGTCTGCA GACCCGAAAG CTACTGGCAG
CTCAACGCAC CGGGTGAAGG CAAGGCCTGC TTTAAGCTCT TGAGTCAACT TCCCAACTGG
CCCAATCAAA CCCTCTTAGG CCTCCCCCTG CTCAACGACC ACCTGGTCAT ATTCGACCGC
TCAGTACATA AAACCGGTGT GATCCGATTC GCTAAGCAAA AATAG
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| Protein sequence | MAGQIKARTL KVPITNVYAK GDYCAQLRLG SQAQRANLIL DTGSSTLVVK QSAVKQNVVN
HSVVNQNAYH PQDDNLLTVT SLAQEVNYGI GGWDGPVVTT RVALCEESCE DEMAFDKRLP
HLHLARQPLV LDACPLAIVS SVKQQQTFGD ADGILGLGYH HLNRSYDLKA YLESHQYSPA
VTYPWPFADA ISLSDTKGKS DCQSTINNES KRQSDTKAKS KTDNKNKKKT ELPFSSEDLK
QFKQFLWQQP EQDLIPYFTA LEEHGLTANK FAFYSRRSSI HVTNGDLSPQ QLANDPLNRG
WLILGGGEEH TELYQGDFHT IRVDHDIYYN VTLTSIRVGD QPPIPAPALD EKYRKNYYSN
AIVDTGASAI ALTEPLYRAL LKSLAAISPK FVPLIAPFKE ISAQERGIDA SLLDLSQWPD
ITFTFLGDMD GDLDENKAAG TQNSDRQAVS IVCRPESYWQ LNAPGEGKAC FKLLSQLPNW
PNQTLLGLPL LNDHLVIFDR SVHKTGVIRF AKQK
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