| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3548 |
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| Symbol | |
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| ID | 5611851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4322689 |
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| End bp | 4323237 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934501 |
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| Product | redoxin domain-containing protein |
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| Protein accession | YP_001475280 |
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| Protein GI | 157376680 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3118] Thioredoxin domain-containing protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGATA ATAACAGCGC CGATAACACT GATACTGAGC TTAAGCCGAC TTTTTTCAGA
CGTGTCCTGG GTTGGGGGAG GCAGCTTGCT CTGTTGATAC TGTTTTCCAT GGTGTTCAGC
GCGGGTCTGG ATATGTGGCG AGGCAAAGAT ATCCCCAGAG ATGATCTTCC CAACATTTCG
GGTATTAGCC TGAAAGGGGA GAGCCTGGAT ATCGCCGCGC TGAGCAGAGA CCAAGCCGTC
TTGGTGTACT TCTGGGGCAC ATGGTGTCCC GTGTGTAACC TCGTTAGTCC AGCAGTGGAT
GTTCTATCGA CGAGCTATTC AGTCGTCACG GTAGCGATGA ATTCGGGAGC CGATGACAAG
ATGGTCAAAT ATCTCAAGCA TAAAGAGTAT GATTTTGAGG TGATTAATGA CTCGAGTAAT
GACATTGCCA GAGACTGGTC GGTACAACTG ACCCCGACCA TAATGGTATT CAAGGATGGT
GAACTTAAGC ATTACACCAC CGGGTTTACC AGTCTGCCTG GCATGTGGTG GCGAATGCTA
TTTACATAA
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| Protein sequence | MSDNNSADNT DTELKPTFFR RVLGWGRQLA LLILFSMVFS AGLDMWRGKD IPRDDLPNIS
GISLKGESLD IAALSRDQAV LVYFWGTWCP VCNLVSPAVD VLSTSYSVVT VAMNSGADDK
MVKYLKHKEY DFEVINDSSN DIARDWSVQL TPTIMVFKDG ELKHYTTGFT SLPGMWWRML
FT
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