| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3528 |
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| Symbol | |
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| ID | 5612108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4297594 |
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| End bp | 4299150 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640934481 |
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| Product | alpha/beta fold family hydrolase/acetyltransferase-like protein |
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| Protein accession | YP_001475260 |
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| Protein GI | 157376660 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGAA GTATCAAGTT TCACTTACTC TCATTATCAC TTATCGGTAT TGTTGCAGGG
TGTGCAACGA CTCAGTATCC AGTGAATAAT ATGCAAGCGT TAACCGTGAC AGAACAATGC
CAGGGAAGCT ATTGGCAAGA CTGTGTCGCC TATCCCTTTC CTGTGCAGTA TGCGCAGGTA
AAAGATGCAA AGGGAGTCGA ATGGCAGGTG GCGTATATGG ACGAGTATGC CGGCGACAAG
AGCACACCTG AGACCGTCGT ACTTATTCAT GGTAAAGGCG TGTATGGCGG ATATTTTGGC
GACTTAATGA AAGCGTTACT GACTCAGGGC TACCGAGTCA TAGTGCCCGA CCTCCCCAAT
TATGGTAAGT CGATCCCTGG AAACCTGGAT AACCCGGTGA CACGTTCGCT CGACGATACC
AGAAGCGCCA TTCATGATCT GCTGGCGAAT AAATTGAACA TAGATAAAGC CAGTTTCCTT
GGCCACTCCA TGGGAGGCCA GTGGGTGATG GGGTATGCGT TAGAATATCC TCAACAAGTG
AATAAAATAG TGCTTGAAGC ATCGGGAGGC ATGGAAGAGT TCCCAACGAG TGTCGCTGGT
TTGCCATTTT TTGGCGATGA GCAGAAAGAT TCTTATGAGA GTTGGGAAGG GATCTGGGGC
AGCACACTGA AGAAAGAGAA AGCGAAGACG GCAGAAGATA TCGTACTGTT TAACTACTTT
AAGGCCAAGA ACCCTAAGAC TGGGGTTATC ATGGACTCTC CTTCCGGCTA CTTCATCAAT
AAAACCCCCA TGACGGATTA CGTGACTCAC GCCCGTCAGT ATATGATCGA TAACTCAAGT
AAGGAGTATA ATGTCTATGC ACAGACCTAT ATCAGAGATA TCTATTCCAT GGGAGTCGAA
GTACGCGTAG AAGATCCACT GAGCCTGGTG AAGAGGATTG ATCAGATAAC GGCGCCAATG
CTTATCACTT ATGGAGAGAA AGAACCCTTT ATCCCAACGA CCATTTTTAG TGGTCAGCAG
AGCTTACGTT GGGATGTGAT TAAGCCTGTG TATGACAAGT TATCGAGTAA AGGCAACGAG
CCCACTGTGG TTATTTACCC TAATGTCGGG CACTTTATCC ATACCGATAT TCCTGAGCAA
TTTCATCAGG ACGTGATTAA ATTCCTTGCT GGAGATAGGA TATCCGGTGC TGAAAAAGTG
TCAGCCTACA AGCCGCCGGT TGTTATGCCT CCTGAAGAGG TGACTGTTTT CTTTGATAAG
TTTAAGCGAG TTTTGCTGAG TCAAAGCAAG GCTAATATAG CCACCTTTTA CGCAGACGAT
TTTGTTGAAA ATGGCTATGA TAAATCAGCA TTTTTAGCGA TTCTATATAG TCAGATGGCT
AAAGTTAAAG ACTATAAAGT CTCTTTAGTT AAGTTCGAGA AAGACCCGAA TGTTGCAGAT
GAGTACTTTA TTGAAGGCAT GGTGAACTTG GGGACTATAT CGGTACCATT TAAAGAGGGT
AGCAAGGTCC GTAAGACATC TGATGGTTGG AAATGGCTGG GTAACAGAAA GTCCTAA
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| Protein sequence | MNRSIKFHLL SLSLIGIVAG CATTQYPVNN MQALTVTEQC QGSYWQDCVA YPFPVQYAQV
KDAKGVEWQV AYMDEYAGDK STPETVVLIH GKGVYGGYFG DLMKALLTQG YRVIVPDLPN
YGKSIPGNLD NPVTRSLDDT RSAIHDLLAN KLNIDKASFL GHSMGGQWVM GYALEYPQQV
NKIVLEASGG MEEFPTSVAG LPFFGDEQKD SYESWEGIWG STLKKEKAKT AEDIVLFNYF
KAKNPKTGVI MDSPSGYFIN KTPMTDYVTH ARQYMIDNSS KEYNVYAQTY IRDIYSMGVE
VRVEDPLSLV KRIDQITAPM LITYGEKEPF IPTTIFSGQQ SLRWDVIKPV YDKLSSKGNE
PTVVIYPNVG HFIHTDIPEQ FHQDVIKFLA GDRISGAEKV SAYKPPVVMP PEEVTVFFDK
FKRVLLSQSK ANIATFYADD FVENGYDKSA FLAILYSQMA KVKDYKVSLV KFEKDPNVAD
EYFIEGMVNL GTISVPFKEG SKVRKTSDGW KWLGNRKS
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