| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3480 |
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| Symbol | |
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| ID | 5613277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4239084 |
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| End bp | 4239578 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934428 |
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| Product | rare lipoprotein B |
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| Protein accession | YP_001475212 |
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| Protein GI | 157376612 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2980] Rare lipoprotein B |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0408224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000129712 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTAATTA GACGCATATG TTTCGCAATA ATGGCATTGA GCATTTTGCT CAGCGCCGGT
TGCGGCTTTA AACTTCAGGG AAGCTACTCT ATCCCAGAGC AGCTAAGAAC CCTGCACCTG
AGTAGTCAAG ATGAGTATAG CGAGCTCACT CGTCTGGTAC GTGAGCGCTT ACGTCTTCAC
AGTATTTCAC TTGTGGATGA ATCTGACGAA ACGCCTACCT TGAATATTTT GCGGGACTCA
CTGGACAGAT CGACCCTCTC CCTTTACCCA ACGGGTAATG TGGCTGAATA TGAATTGACC
TATCACGTAA CATTCGCAGT AAGCTTACCG GAAGGTGAGG CACAGACATT CGAAGTCGAT
ATTCAGCGGG ATTACCTCGA TGATCCACGC ACTGCGTTAG CAAAAAGCCG AGAGATGGAG
CTACTCTTAA AAGAGATGCG TATCCAGGCA GCAGATCAGA TGATACAGAC ACTCGCATCG
ATAGAGATAA ATTGA
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| Protein sequence | MLIRRICFAI MALSILLSAG CGFKLQGSYS IPEQLRTLHL SSQDEYSELT RLVRERLRLH
SISLVDESDE TPTLNILRDS LDRSTLSLYP TGNVAEYELT YHVTFAVSLP EGEAQTFEVD
IQRDYLDDPR TALAKSREME LLLKEMRIQA ADQMIQTLAS IEIN
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