| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3349 |
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| Symbol | |
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| ID | 5610392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4074147 |
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| End bp | 4074659 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934287 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475081 |
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| Protein GI | 157376481 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3154] Putative lipid carrier protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAC CACTTCTGGG TAATGTAGCC AGTCAGCTGT TAGAGCTGGG CCCCAAGCTT
GTTCGGAGAC CATTAGCCTT AGTGCCTTTT CGATTAAAGG CGGATGTTCT GGAGCGGTTA
CTCGGTTTAC TGCTCGCTCA GCAAGCAGAA GATGAGGAGC TGGATTTTCT GCAGGATAGT
TGGGTCGCCA TACATGTCGA AGATATGGGG CTCGAGTTTG AGGTCAGCTT CGATGGCCGC
TGGCAGGTTC GTCAACCAAC AAATGCCGAA GTGACATTTA CCGGTCAATC TAAAGAGTTG
CTATTGATCG CGGCAGGTAA AGAAGATCCC GACACATTGT TTTTCCAGCG TAAGCTATCT
ATCGAAGGTG ACACCGAGCT GGGGCTTGAG ATCAAAAACC TACTGCTCAG TATTGAATTC
GATACCATGC CCTCTCCGAT AAGGCACAGC ATCGAGAAGT TGGCGCAGCT TATTCAGCAG
TTACAGCTCA AGGCAAACCC TGAAACGGCG TAA
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| Protein sequence | MQKPLLGNVA SQLLELGPKL VRRPLALVPF RLKADVLERL LGLLLAQQAE DEELDFLQDS
WVAIHVEDMG LEFEVSFDGR WQVRQPTNAE VTFTGQSKEL LLIAAGKEDP DTLFFQRKLS
IEGDTELGLE IKNLLLSIEF DTMPSPIRHS IEKLAQLIQQ LQLKANPETA
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